Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:70332412-72237581

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29683 7 70178868 to 70337852 158984 - lincRNA gene predicted gene, 29683
Cpgi19245 7 70335047 to 70335234 187 CpG island CpG island 19245
Cpgi19246 7 70337516 to 70338198 682 CpG island CpG island 19246
Tssr72898 7 70337827 to 70337877 50 - TSS region transcription start site region 72898
Gm39030 7 70341416 to 70351235 9819 - lncRNA gene predicted gene, 39030
Gm44946 7 70345239 to 70345810 571 - lincRNA gene predicted gene 44946
Cpgi19247 7 70345970 to 70346489 519 CpG island CpG island 19247
Gm44948 7 70347548 to 70347696 148 - lincRNA gene predicted gene 44948
Cpgi19248 7 70347721 to 70347959 238 CpG island CpG island 19248
Cpgi19249 7 70348458 to 70348717 259 CpG island CpG island 19249
Cpgi19250 7 70350848 to 70351459 611 CpG island CpG island 19250
Nr2f2 7 70351944 to 70366735 14791 - protein coding gene nuclear receptor subfamily 2, group F, member 2
Tssr72899 7 70352917 to 70352922 5 - TSS region transcription start site region 72899
Tssr72900 7 70353984 to 70353999 15 - TSS region transcription start site region 72900
Tssr2299 7 70354202 to 70354219 17 - TSS region transcription start site region 2299
Tssr72901 7 70354533 to 70354538 5 - TSS region transcription start site region 72901
Tssr72902 7 70354678 to 70354716 38 - TSS region transcription start site region 72902
Cpgi19251 7 70357796 to 70358306 510 CpG island CpG island 19251
Tssr72903 7 70357923 to 70357963 40 - TSS region transcription start site region 72903
Cpgi19252 7 70358804 to 70359203 399 CpG island CpG island 19252
Tssr72904 7 70359017 to 70359043 26 - TSS region transcription start site region 72904
Cpgi19253 7 70359656 to 70362381 2725 CpG island CpG island 19253
Tssr72905 7 70359931 to 70359948 17 - TSS region transcription start site region 72905
Tssr67166 7 70360524 to 70360540 16 + TSS region transcription start site region 67166
Tssr72906 7 70360731 to 70360746 15 - TSS region transcription start site region 72906
Tssr72907 7 70361425 to 70361437 12 - TSS region transcription start site region 72907
Tssr72908 7 70361455 to 70361464 9 - TSS region transcription start site region 72908
Tssr72909 7 70361514 to 70361523 9 - TSS region transcription start site region 72909
Tssr72910 7 70361528 to 70361549 21 - TSS region transcription start site region 72910
Tssr72911 7 70361571 to 70361576 5 - TSS region transcription start site region 72911
Tssr72912 7 70361578 to 70361583 5 - TSS region transcription start site region 72912
Tssr72913 7 70361597 to 70361611 14 - TSS region transcription start site region 72913
Tssr72914 7 70361634 to 70361684 50 - TSS region transcription start site region 72914
Tssr72915 7 70361700 to 70361707 7 - TSS region transcription start site region 72915
Tssr72916 7 70361723 to 70361748 25 - TSS region transcription start site region 72916
Tssr72917 7 70361750 to 70361777 27 - TSS region transcription start site region 72917
Tssr72918 7 70361797 to 70361810 13 - TSS region transcription start site region 72918
Tssr67167 7 70365081 to 70365102 21 + TSS region transcription start site region 67167
Tssr67168 7 70365260 to 70365263 3 + TSS region transcription start site region 67168
Tssr67169 7 70365349 to 70365361 12 + TSS region transcription start site region 67169
Tssr67170 7 70365375 to 70365399 24 + TSS region transcription start site region 67170
B130024G19Rik 7 70365383 to 70411146 45763 + lncRNA gene RIKEN cDNA B130024G19 gene
Cpgi19254 7 70365385 to 70365583 198 CpG island CpG island 19254
Tssr72919 7 70366146 to 70366163 17 - TSS region transcription start site region 72919
Tssr72920 7 70366348 to 70366416 68 - TSS region transcription start site region 72920
Tssr72921 7 70366425 to 70366466 41 - TSS region transcription start site region 72921
Tssr72922 7 70366517 to 70366564 47 - TSS region transcription start site region 72922
Tssr72923 7 70366736 to 70366771 35 - TSS region transcription start site region 72923
Tssr72924 7 70367042 to 70367051 9 - TSS region transcription start site region 72924
Cpgi19255 7 70369164 to 70370425 1261 CpG island CpG island 19255
Gm28258 7 70372023 to 70379741 7718 - lincRNA gene predicted gene 28258
Tssr67171 7 70381747 to 70381752 5 + TSS region transcription start site region 67171
Gm44532 7 70420915 to 70453222 32307 - lincRNA gene predicted gene 44532
Tssr72925 7 70453237 to 70453243 6 - TSS region transcription start site region 72925
Gm7656 7 70490848 to 70491851 1003 + pseudogene predicted gene 7656
Gm44811 7 70531222 to 70531449 227 + unclassified gene predicted gene 44811
Gm35842 7 70548869 to 70554924 6055 + lincRNA gene predicted gene, 35842
Gm44813 7 70571322 to 70574414 3092 + lincRNA gene predicted gene 44813
Gm44812 7 70574834 to 70585751 10917 + lincRNA gene predicted gene 44812
Gm35894 7 70586453 to 70589443 2990 - lncRNA gene predicted gene, 35894
Gm44809 7 70592890 to 70593882 992 + unclassified gene predicted gene 44809
Tssr67172 7 70606790 to 70606801 11 + TSS region transcription start site region 67172
Cpgi19256 7 70625391 to 70625660 269 CpG island CpG island 19256
Gm44808 7 70638610 to 70639917 1307 + lincRNA gene predicted gene 44808
Gm39031 7 70708125 to 70716474 8349 + lncRNA gene predicted gene, 39031
Gm24880 7 70752416 to 70752500 84 + rRNA gene predicted gene, 24880
Gm39032 7 70802040 to 70811451 9411 + lncRNA gene predicted gene, 39032
Tssr67173 7 70871132 to 70871152 20 + TSS region transcription start site region 67173
Gm34783 7 70912518 to 70912820 302 - pseudogene predicted gene, 34783
Tssr67174 7 70951314 to 70951321 7 + TSS region transcription start site region 67174
Gm42397 7 70957920 to 70975030 17110 + lincRNA gene predicted gene, 42397
Tssr2300 7 70990644 to 70990646 2 + TSS region transcription start site region 2300
Gm45990 7 71032052 to 71035420 3368 - lncRNA gene predicted gene, 45990
Gm36011 7 71088427 to 71116539 28112 - lincRNA gene predicted gene, 36011
Gm39033 7 71097047 to 71123594 26547 + lincRNA gene predicted gene, 39033
Gm36071 7 71154230 to 71186863 32633 + lncRNA gene predicted gene, 36071
6030442E23Rik 7 71217049 to 71224409 7360 + lincRNA gene RIKEN cDNA 6030442E23 gene
Tssr67175 7 71229312 to 71229314 2 + TSS region transcription start site region 67175
Gm36212 7 71234645 to 71265466 30821 - lncRNA gene predicted gene, 36212
D7Mit337 7 71251141 to 71251284 143 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology-337
Gm39034 7 71282412 to 71287581 5169 - lncRNA gene predicted gene, 39034
Gm45066 7 71331493 to 71334043 2550 + unclassified gene predicted gene 45066
Gm10172 7 71332363 to 71332921 558 - pseudogene predicted gene 10172
Gm10295 7 71348961 to 71351485 2524 - protein coding gene predicted gene 10295
Gm29295 7 71351451 to 71391272 39821 + lincRNA gene predicted gene 29295
Gm29328 7 71370232 to 71379885 9653 + lincRNA gene predicted gene 29328
Gm36260 7 71373010 to 71379654 6644 - lncRNA gene predicted gene, 36260
Gm44689 7 71681775 to 71688447 6672 - lincRNA gene predicted gene 44689
Gm7675 7 71696714 to 71697399 685 + pseudogene predicted gene 7675
Cpgi19257 7 71705318 to 71706045 727 CpG island CpG island 19257
Gm44688 7 71706076 to 71706612 536 + unclassified gene predicted gene 44688
Gm17988 7 71717837 to 71718371 534 + pseudogene predicted gene, 17988
Tssr72926 7 71719217 to 71719221 4 - TSS region transcription start site region 72926
4930441H08Rik 7 71909695 to 71939191 29496 + lincRNA gene RIKEN cDNA 4930441H08 gene
Gm36633 7 71947527 to 71962018 14491 - lincRNA gene predicted gene, 36633
1700011C11Rik 7 71961175 to 72027317 66142 + lincRNA gene RIKEN cDNA 1700011C11 gene
Mctp2 7 72077827 to 72306595 228768 - protein coding gene multiple C2 domains, transmembrane 2
Gm36696 7 72110761 to 72113456 2695 + antisense lncRNA gene predicted gene, 36696
Gm45715 7 72156094 to 72157133 1039 - sense intronic lncRNA gene predicted gene 45715