Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:69253437-78324118

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559 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbthq2 7 66010000 to 77900000 11890000 QTL trabecular bone thickness QTL 2
Gm44533 7 69259595 to 69259862 267 + pseudogene predicted gene 44533
Gm34838 7 69391548 to 69400198 8650 - lincRNA gene predicted gene, 34838
Gm38584 7 69485424 to 69490801 5377 - lincRNA gene predicted gene, 38584
4930402F11Rik 7 69496094 to 69499689 3595 + lincRNA gene RIKEN cDNA 4930402F11 gene
Tssr67158 7 69496097 to 69496132 35 + TSS region transcription start site region 67158
Gm23815 7 69498579 to 69498685 106 - snRNA gene predicted gene, 23815
V125Dq6 7 69500000 to 69500000 0 QTL vitamin D active form serum level QTL 6
Tssr67159 7 69579655 to 69579658 3 + TSS region transcription start site region 67159
Tssr67160 7 69579702 to 69579713 11 + TSS region transcription start site region 67160
Gm44535 7 69579708 to 69582843 3135 + unclassified gene predicted gene 44535
Gm7627 7 69605842 to 69606840 998 - pseudogene predicted gene 7627
Tssr72889 7 69756899 to 69756901 2 - TSS region transcription start site region 72889
Cpgi19240 7 69770474 to 69770740 266 CpG island CpG island 19240
Gm35209 7 69799123 to 69801739 2616 - lncRNA gene predicted gene, 35209
Gm44690 7 69883979 to 69884360 381 - pseudogene predicted gene 44690
Tssr72890 7 69908049 to 69908052 3 - TSS region transcription start site region 72890
Tssr72891 7 69908060 to 69908067 7 - TSS region transcription start site region 72891
Tssr72892 7 69908087 to 69908098 11 - TSS region transcription start site region 72892
Tssr72893 7 69909548 to 69909554 6 - TSS region transcription start site region 72893
Tssr72894 7 69909557 to 69909563 6 - TSS region transcription start site region 72894
Tssr72895 7 69909577 to 69909594 17 - TSS region transcription start site region 72895
Tssr72896 7 69909595 to 69909596 1 - TSS region transcription start site region 72896
Tssr72897 7 69909632 to 69909640 8 - TSS region transcription start site region 72897
Tssr67161 7 69909720 to 69909723 3 + TSS region transcription start site region 67161
Tssr67162 7 69909733 to 69909741 8 + TSS region transcription start site region 67162
Tssr67163 7 69909756 to 69909768 12 + TSS region transcription start site region 67163
Tssr67164 7 69917901 to 69917906 5 + TSS region transcription start site region 67164
Tssr67165 7 69918175 to 69918179 4 + TSS region transcription start site region 67165
4933423L19Rik 7 69948900 to 69950363 1463 + unclassified gene RIKEN cDNA 4933423L19 gene
Gm24120 7 69957776 to 69957904 128 - snoRNA gene predicted gene, 24120
Cpgi19241 7 70177035 to 70177203 168 CpG island CpG island 19241
Gm29683 7 70178868 to 70337852 158984 - lincRNA gene predicted gene, 29683
Gm35271 7 70202844 to 70207234 4390 + lncRNA gene predicted gene, 35271
Gm35325 7 70207435 to 70209182 1747 + lincRNA gene predicted gene, 35325
Gm29327 7 70248973 to 70249776 803 - lincRNA gene predicted gene 29327
Cpgi19242 7 70280300 to 70281733 1433 CpG island CpG island 19242
Cpgi19243 7 70287889 to 70288242 353 CpG island CpG island 19243
Cpgi19244 7 70331435 to 70332177 742 CpG island CpG island 19244
Cpgi19245 7 70335047 to 70335234 187 CpG island CpG island 19245
Cpgi19246 7 70337516 to 70338198 682 CpG island CpG island 19246
Tssr72898 7 70337827 to 70337877 50 - TSS region transcription start site region 72898
Gm39030 7 70341416 to 70351235 9819 - lncRNA gene predicted gene, 39030
Gm44946 7 70345239 to 70345810 571 - lincRNA gene predicted gene 44946
Cpgi19247 7 70345970 to 70346489 519 CpG island CpG island 19247
Gm44948 7 70347548 to 70347696 148 - lincRNA gene predicted gene 44948
Cpgi19248 7 70347721 to 70347959 238 CpG island CpG island 19248
Cpgi19249 7 70348458 to 70348717 259 CpG island CpG island 19249
Cpgi19250 7 70350848 to 70351459 611 CpG island CpG island 19250
Nr2f2 7 70351944 to 70366735 14791 - protein coding gene nuclear receptor subfamily 2, group F, member 2
Tssr72899 7 70352917 to 70352922 5 - TSS region transcription start site region 72899
Tssr72900 7 70353984 to 70353999 15 - TSS region transcription start site region 72900
Tssr2299 7 70354202 to 70354219 17 - TSS region transcription start site region 2299
Tssr72901 7 70354533 to 70354538 5 - TSS region transcription start site region 72901
Tssr72902 7 70354678 to 70354716 38 - TSS region transcription start site region 72902
Cpgi19251 7 70357796 to 70358306 510 CpG island CpG island 19251
Tssr72903 7 70357923 to 70357963 40 - TSS region transcription start site region 72903
Cpgi19252 7 70358804 to 70359203 399 CpG island CpG island 19252
Tssr72904 7 70359017 to 70359043 26 - TSS region transcription start site region 72904
Cpgi19253 7 70359656 to 70362381 2725 CpG island CpG island 19253
Tssr72905 7 70359931 to 70359948 17 - TSS region transcription start site region 72905
Tssr67166 7 70360524 to 70360540 16 + TSS region transcription start site region 67166
Tssr72906 7 70360731 to 70360746 15 - TSS region transcription start site region 72906
Tssr72907 7 70361425 to 70361437 12 - TSS region transcription start site region 72907
Tssr72908 7 70361455 to 70361464 9 - TSS region transcription start site region 72908
Tssr72909 7 70361514 to 70361523 9 - TSS region transcription start site region 72909
Tssr72910 7 70361528 to 70361549 21 - TSS region transcription start site region 72910
Tssr72911 7 70361571 to 70361576 5 - TSS region transcription start site region 72911
Tssr72912 7 70361578 to 70361583 5 - TSS region transcription start site region 72912
Tssr72913 7 70361597 to 70361611 14 - TSS region transcription start site region 72913
Tssr72914 7 70361634 to 70361684 50 - TSS region transcription start site region 72914
Tssr72915 7 70361700 to 70361707 7 - TSS region transcription start site region 72915
Tssr72916 7 70361723 to 70361748 25 - TSS region transcription start site region 72916
Tssr72917 7 70361750 to 70361777 27 - TSS region transcription start site region 72917
Tssr72918 7 70361797 to 70361810 13 - TSS region transcription start site region 72918
Tssr67167 7 70365081 to 70365102 21 + TSS region transcription start site region 67167
Tssr67168 7 70365260 to 70365263 3 + TSS region transcription start site region 67168
Tssr67169 7 70365349 to 70365361 12 + TSS region transcription start site region 67169
Tssr67170 7 70365375 to 70365399 24 + TSS region transcription start site region 67170
B130024G19Rik 7 70365383 to 70411146 45763 + lncRNA gene RIKEN cDNA B130024G19 gene
Cpgi19254 7 70365385 to 70365583 198 CpG island CpG island 19254
Tssr72919 7 70366146 to 70366163 17 - TSS region transcription start site region 72919
Tssr72920 7 70366348 to 70366416 68 - TSS region transcription start site region 72920
Tssr72921 7 70366425 to 70366466 41 - TSS region transcription start site region 72921
Tssr72922 7 70366517 to 70366564 47 - TSS region transcription start site region 72922
Tssr72923 7 70366736 to 70366771 35 - TSS region transcription start site region 72923
Tssr72924 7 70367042 to 70367051 9 - TSS region transcription start site region 72924
Cpgi19255 7 70369164 to 70370425 1261 CpG island CpG island 19255
Gm28258 7 70372023 to 70379741 7718 - lincRNA gene predicted gene 28258
Tssr67171 7 70381747 to 70381752 5 + TSS region transcription start site region 67171
Gm44532 7 70420915 to 70453222 32307 - lincRNA gene predicted gene 44532
Tssr72925 7 70453237 to 70453243 6 - TSS region transcription start site region 72925
Gm7656 7 70490848 to 70491851 1003 + pseudogene predicted gene 7656
Gm44811 7 70531222 to 70531449 227 + unclassified gene predicted gene 44811
Gm35842 7 70548869 to 70554924 6055 + lincRNA gene predicted gene, 35842
Gm44813 7 70571322 to 70574414 3092 + lincRNA gene predicted gene 44813
Gm44812 7 70574834 to 70585751 10917 + lincRNA gene predicted gene 44812
Gm35894 7 70586453 to 70589443 2990 - lncRNA gene predicted gene, 35894
Gm44809 7 70592890 to 70593882 992 + unclassified gene predicted gene 44809
Tssr67172 7 70606790 to 70606801 11 + TSS region transcription start site region 67172
Cpgi19256 7 70625391 to 70625660 269 CpG island CpG island 19256
Gm44808 7 70638610 to 70639917 1307 + lincRNA gene predicted gene 44808
Gm39031 7 70708125 to 70716474 8349 + lncRNA gene predicted gene, 39031
Gm24880 7 70752416 to 70752500 84 + rRNA gene predicted gene, 24880
Gm39032 7 70802040 to 70811451 9411 + lncRNA gene predicted gene, 39032
Tssr67173 7 70871132 to 70871152 20 + TSS region transcription start site region 67173
Gm34783 7 70912518 to 70912820 302 - pseudogene predicted gene, 34783
Tssr67174 7 70951314 to 70951321 7 + TSS region transcription start site region 67174
Gm42397 7 70957920 to 70975030 17110 + lincRNA gene predicted gene, 42397
Tssr2300 7 70990644 to 70990646 2 + TSS region transcription start site region 2300
Gm45990 7 71032052 to 71035420 3368 - lncRNA gene predicted gene, 45990
Gm36011 7 71088427 to 71116539 28112 - lincRNA gene predicted gene, 36011
Gm39033 7 71097047 to 71123594 26547 + lincRNA gene predicted gene, 39033
Gm36071 7 71154230 to 71186863 32633 + lncRNA gene predicted gene, 36071
6030442E23Rik 7 71217049 to 71224409 7360 + lincRNA gene RIKEN cDNA 6030442E23 gene
Tssr67175 7 71229312 to 71229314 2 + TSS region transcription start site region 67175
Gm36212 7 71234645 to 71265466 30821 - lncRNA gene predicted gene, 36212
D7Mit337 7 71251141 to 71251284 143 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology-337
Gm39034 7 71282412 to 71287581 5169 - lncRNA gene predicted gene, 39034
Gm45066 7 71331493 to 71334043 2550 + unclassified gene predicted gene 45066
Gm10172 7 71332363 to 71332921 558 - pseudogene predicted gene 10172
Gm10295 7 71348961 to 71351485 2524 - protein coding gene predicted gene 10295
Gm29295 7 71351451 to 71391272 39821 + lincRNA gene predicted gene 29295
Gm29328 7 71370232 to 71379885 9653 + lincRNA gene predicted gene 29328
Gm36260 7 71373010 to 71379654 6644 - lncRNA gene predicted gene, 36260
Gm44689 7 71681775 to 71688447 6672 - lincRNA gene predicted gene 44689
Gm7675 7 71696714 to 71697399 685 + pseudogene predicted gene 7675
Cpgi19257 7 71705318 to 71706045 727 CpG island CpG island 19257
Gm44688 7 71706076 to 71706612 536 + unclassified gene predicted gene 44688
Gm17988 7 71717837 to 71718371 534 + pseudogene predicted gene, 17988
Tssr72926 7 71719217 to 71719221 4 - TSS region transcription start site region 72926
4930441H08Rik 7 71909695 to 71939191 29496 + lincRNA gene RIKEN cDNA 4930441H08 gene
Gm36633 7 71947527 to 71962018 14491 - lincRNA gene predicted gene, 36633
1700011C11Rik 7 71961175 to 72027317 66142 + lincRNA gene RIKEN cDNA 1700011C11 gene
Mctp2 7 72077827 to 72306595 228768 - protein coding gene multiple C2 domains, transmembrane 2
Gm36696 7 72110761 to 72113456 2695 + antisense lncRNA gene predicted gene, 36696
Gm45715 7 72156094 to 72157133 1039 - sense intronic lncRNA gene predicted gene 45715
Tssr72927 7 72248957 to 72248961 4 - TSS region transcription start site region 72927
Tssr72928 7 72279705 to 72279708 3 - TSS region transcription start site region 72928
Cpgi19258 7 72306328 to 72306954 626 CpG island CpG island 19258
Tssr72929 7 72306600 to 72306647 47 - TSS region transcription start site region 72929
Tssr72930 7 72306740 to 72306755 15 - TSS region transcription start site region 72930
Gm39035 7 72306862 to 72323340 16478 + lncRNA gene predicted gene, 39035
Tssr67176 7 72306874 to 72306914 40 + TSS region transcription start site region 67176
Tssr67177 7 72326480 to 72326504 24 + TSS region transcription start site region 67177
D7Mit274 7 72341602 to 72341715 113 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 274
Tssr67178 7 72442803 to 72442804 1 + TSS region transcription start site region 67178
D7Mit317 7 72490740 to 72490841 101 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 317
Gm37620 7 72601989 to 72602489 500 + unclassified gene predicted gene, 37620
Gm28745 7 72637212 to 72637516 304 - lincRNA gene predicted gene 28745
Rpl17-ps10 7 72648757 to 72649311 554 - pseudogene ribosomal protein L17, pseudogene 10
Tssr72931 7 72649349 to 72649359 10 - TSS region transcription start site region 72931
Gm28744 7 72668017 to 72668356 339 - lincRNA gene predicted gene 28744
Tssr67179 7 72672777 to 72672792 15 + TSS region transcription start site region 67179
Kansl2-ps 7 72672818 to 72674278 1460 + pseudogene KAT8 regulatory NSL complex subunit 2, pseudogene
Gm7693 7 72712634 to 72713621 987 - pseudogene predicted gene 7693
Gm36865 7 72745571 to 72826646 81075 - lncRNA gene predicted gene, 36865
Tssr2301 7 72910528 to 72910529 1 - TSS region transcription start site region 2301
Gm5335 7 72989154 to 72990153 999 - pseudogene predicted gene 5335
Tssr2302 7 73005163 to 73005164 1 + TSS region transcription start site region 2302
Gm44725 7 73089423 to 73092616 3193 + lincRNA gene predicted gene 44725
Gm6567 7 73097752 to 73102068 4316 - lincRNA gene predicted gene 6567
Tssr72932 7 73105160 to 73105170 10 - TSS region transcription start site region 72932
Tssr72933 7 73105214 to 73105228 14 - TSS region transcription start site region 72933
Tssr67180 7 73105295 to 73105304 9 + TSS region transcription start site region 67180
Tssr67181 7 73105306 to 73105323 17 + TSS region transcription start site region 67181
Tssr67182 7 73105325 to 73105344 19 + TSS region transcription start site region 67182
Tssr67183 7 73105347 to 73105354 7 + TSS region transcription start site region 67183
Tssr67184 7 73108265 to 73108304 39 + TSS region transcription start site region 67184
Tssr67185 7 73112325 to 73112341 16 + TSS region transcription start site region 67185
4933435G04Rik 7 73124451 to 73126558 2107 + lincRNA gene RIKEN cDNA 4933435G04 gene
Tssr67186 7 73127868 to 73127878 10 + TSS region transcription start site region 67186
Gm28746 7 73185014 to 73185393 379 - lincRNA gene predicted gene 28746
Gm20083 7 73185744 to 73189446 3702 + lincRNA gene predicted gene, 20083
Tssr67187 7 73185766 to 73185775 9 + TSS region transcription start site region 67187
Tssr67188 7 73185798 to 73185809 11 + TSS region transcription start site region 67188
Gm30075 7 73202775 to 73238531 35756 - lincRNA gene predicted gene, 30075
Powg 7 73207357 to 92932955 19725598 QTL post-ovarectomy weight gain
Tssr72934 7 73238645 to 73238662 17 - TSS region transcription start site region 72934
Tssr67189 7 73255965 to 73255997 32 + TSS region transcription start site region 67189
Cpgi19259 7 73310323 to 73310826 503 CpG island CpG island 19259
4930429H19Rik 7 73310380 to 73315193 4813 + lincRNA gene RIKEN cDNA 4930429H19 gene
Tssr72935 7 73310944 to 73310956 12 - TSS region transcription start site region 72935
A730056A06Rik 7 73314003 to 73375774 61771 - antisense lncRNA gene RIKEN cDNA A730056A06 gene
Cpgi19260 7 73323243 to 73323394 151 CpG island CpG island 19260
Cpgi19261 7 73372328 to 73372700 372 CpG island CpG island 19261
Cpgi19262 7 73374918 to 73376455 1537 CpG island CpG island 19262
Tssr67190 7 73375480 to 73375492 12 + TSS region transcription start site region 67190
Tssr67191 7 73375494 to 73375549 55 + TSS region transcription start site region 67191
Rgma 7 73375520 to 73419899 44379 + protein coding gene repulsive guidance molecule family member A
Tssr67192 7 73375566 to 73375578 12 + TSS region transcription start site region 67192
Tssr67193 7 73375585 to 73375597 12 + TSS region transcription start site region 67193
Tssr72936 7 73375722 to 73375744 22 - TSS region transcription start site region 72936
Tssr67194 7 73375814 to 73375833 19 + TSS region transcription start site region 67194
Tssr67195 7 73375840 to 73375856 16 + TSS region transcription start site region 67195
Cpgi19263 7 73390690 to 73392019 1329 CpG island CpG island 19263
Tssr67196 7 73391240 to 73391296 56 + TSS region transcription start site region 67196
Cpgi19264 7 73399726 to 73400104 378 CpG island CpG island 19264
Gm44758 7 73404350 to 73406417 2067 + unclassified gene predicted gene 44758
Cpgi19265 7 73409186 to 73409566 380 CpG island CpG island 19265