Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:68323579-70673685

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140 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam169b 7 68273839 to 68363089 89250 + protein coding gene family with sequence similarity 169, member B
Tssr67147 7 68329244 to 68329284 40 + TSS region transcription start site region 67147
Gm44888 7 68332989 to 68335529 2540 + unclassified gene predicted gene 44888
Tssr67148 7 68338337 to 68338340 3 + TSS region transcription start site region 67148
Gm16158 7 68351384 to 68353581 2197 - antisense lncRNA gene predicted gene 16158
Tssr72883 7 68353196 to 68353221 25 - TSS region transcription start site region 72883
Tssr67149 7 68364104 to 68364110 6 + TSS region transcription start site region 67149
Gm44889 7 68384779 to 68392029 7250 + lincRNA gene predicted gene 44889
4933436H12Rik 7 68417424 to 68426133 8709 + lincRNA gene RIKEN cDNA 4933436H12 gene
Tssr67150 7 68418451 to 68418459 8 + TSS region transcription start site region 67150
Tssr67151 7 68433069 to 68433075 6 + TSS region transcription start site region 67151
Tssr67152 7 68433093 to 68433109 16 + TSS region transcription start site region 67152
Gm44886 7 68439373 to 68441722 2349 + lincRNA gene predicted gene 44886
Eae43 7 68475206 to 68475345 139 QTL experimental allergic encephalomyelitis susceptibility 43
Bwq11 7 68475206 to 68475345 139 QTL body weight QTL 11
D7Mit233 7 68475206 to 68475345 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 233
Gm34549 7 68488071 to 68490897 2826 + lincRNA gene predicted gene, 34549
Gm44887 7 68598677 to 68598854 177 - pseudogene predicted gene 44887
Tssr67153 7 68618433 to 68618446 13 + TSS region transcription start site region 67153
Tssr67154 7 68618452 to 68618464 12 + TSS region transcription start site region 67154
Gm5334 7 68618838 to 68619557 719 + pseudogene predicted pseudogene 5334
Gm44692 7 68719170 to 68726467 7297 - lincRNA gene predicted gene 44692
Arrdc4 7 68736994 to 68749238 12244 - protein coding gene arrestin domain containing 4
Tssr72884 7 68742629 to 68742643 14 - TSS region transcription start site region 72884
Tssr67155 7 68748193 to 68748220 27 + TSS region transcription start site region 67155
Cpgi19239 7 68748638 to 68749579 941 CpG island CpG island 19239
Tssr72885 7 68749170 to 68749233 63 - TSS region transcription start site region 72885
Tssr72886 7 68749242 to 68749251 9 - TSS region transcription start site region 72886
Tssr72887 7 68768328 to 68768332 4 - TSS region transcription start site region 72887
Gm34612 7 68792322 to 68818694 26372 + lncRNA gene predicted gene, 34612
Gm34664 7 68843099 to 68916016 72917 - lincRNA gene predicted gene, 34664
Tssr67156 7 68860242 to 68860249 7 + TSS region transcription start site region 67156
Tssr72888 7 68915989 to 68916016 27 - TSS region transcription start site region 72888
Gm23795 7 68952100 to 68952236 136 - snoRNA gene predicted gene, 23795
Tssr67157 7 68979441 to 68979452 11 + TSS region transcription start site region 67157
Gm44691 7 68989404 to 69008173 18769 + lincRNA gene predicted gene 44691
Gm34782 7 69056742 to 69079291 22549 + lncRNA gene predicted gene, 34782
Gm39029 7 69056822 to 69064762 7940 - lncRNA gene predicted gene, 39029
Gm5342 7 69209884 to 69210886 1002 + pseudogene predicted gene 5342
Gm44533 7 69259595 to 69259862 267 + pseudogene predicted gene 44533
Gm34838 7 69391548 to 69400198 8650 - lincRNA gene predicted gene, 34838
Gm38584 7 69485424 to 69490801 5377 - lincRNA gene predicted gene, 38584
4930402F11Rik 7 69496094 to 69499689 3595 + lincRNA gene RIKEN cDNA 4930402F11 gene
Tssr67158 7 69496097 to 69496132 35 + TSS region transcription start site region 67158
Gm23815 7 69498579 to 69498685 106 - snRNA gene predicted gene, 23815
V125Dq6 7 69500000 to 69500000 0 QTL vitamin D active form serum level QTL 6
Tssr67159 7 69579655 to 69579658 3 + TSS region transcription start site region 67159
Tssr67160 7 69579702 to 69579713 11 + TSS region transcription start site region 67160
Gm44535 7 69579708 to 69582843 3135 + unclassified gene predicted gene 44535
Gm7627 7 69605842 to 69606840 998 - pseudogene predicted gene 7627
Tssr72889 7 69756899 to 69756901 2 - TSS region transcription start site region 72889
Cpgi19240 7 69770474 to 69770740 266 CpG island CpG island 19240
Gm35209 7 69799123 to 69801739 2616 - lncRNA gene predicted gene, 35209
Gm44690 7 69883979 to 69884360 381 - pseudogene predicted gene 44690
Tssr72890 7 69908049 to 69908052 3 - TSS region transcription start site region 72890
Tssr72891 7 69908060 to 69908067 7 - TSS region transcription start site region 72891
Tssr72892 7 69908087 to 69908098 11 - TSS region transcription start site region 72892
Tssr72893 7 69909548 to 69909554 6 - TSS region transcription start site region 72893
Tssr72894 7 69909557 to 69909563 6 - TSS region transcription start site region 72894
Tssr72895 7 69909577 to 69909594 17 - TSS region transcription start site region 72895
Tssr72896 7 69909595 to 69909596 1 - TSS region transcription start site region 72896
Tssr72897 7 69909632 to 69909640 8 - TSS region transcription start site region 72897
Tssr67161 7 69909720 to 69909723 3 + TSS region transcription start site region 67161
Tssr67162 7 69909733 to 69909741 8 + TSS region transcription start site region 67162
Tssr67163 7 69909756 to 69909768 12 + TSS region transcription start site region 67163
Tssr67164 7 69917901 to 69917906 5 + TSS region transcription start site region 67164
Tssr67165 7 69918175 to 69918179 4 + TSS region transcription start site region 67165
4933423L19Rik 7 69948900 to 69950363 1463 + unclassified gene RIKEN cDNA 4933423L19 gene
Gm24120 7 69957776 to 69957904 128 - snoRNA gene predicted gene, 24120
Cpgi19241 7 70177035 to 70177203 168 CpG island CpG island 19241
Gm29683 7 70178868 to 70337852 158984 - lincRNA gene predicted gene, 29683
Gm35271 7 70202844 to 70207234 4390 + lncRNA gene predicted gene, 35271
Gm35325 7 70207435 to 70209182 1747 + lincRNA gene predicted gene, 35325
Gm29327 7 70248973 to 70249776 803 - lincRNA gene predicted gene 29327
Cpgi19242 7 70280300 to 70281733 1433 CpG island CpG island 19242
Cpgi19243 7 70287889 to 70288242 353 CpG island CpG island 19243
Cpgi19244 7 70331435 to 70332177 742 CpG island CpG island 19244
Cpgi19245 7 70335047 to 70335234 187 CpG island CpG island 19245
Cpgi19246 7 70337516 to 70338198 682 CpG island CpG island 19246
Tssr72898 7 70337827 to 70337877 50 - TSS region transcription start site region 72898
Gm39030 7 70341416 to 70351235 9819 - lncRNA gene predicted gene, 39030
Gm44946 7 70345239 to 70345810 571 - lincRNA gene predicted gene 44946
Cpgi19247 7 70345970 to 70346489 519 CpG island CpG island 19247
Gm44948 7 70347548 to 70347696 148 - lincRNA gene predicted gene 44948
Cpgi19248 7 70347721 to 70347959 238 CpG island CpG island 19248
Cpgi19249 7 70348458 to 70348717 259 CpG island CpG island 19249
Cpgi19250 7 70350848 to 70351459 611 CpG island CpG island 19250
Nr2f2 7 70351944 to 70366735 14791 - protein coding gene nuclear receptor subfamily 2, group F, member 2
Tssr72899 7 70352917 to 70352922 5 - TSS region transcription start site region 72899
Tssr72900 7 70353984 to 70353999 15 - TSS region transcription start site region 72900
Tssr2299 7 70354202 to 70354219 17 - TSS region transcription start site region 2299
Tssr72901 7 70354533 to 70354538 5 - TSS region transcription start site region 72901
Tssr72902 7 70354678 to 70354716 38 - TSS region transcription start site region 72902
Cpgi19251 7 70357796 to 70358306 510 CpG island CpG island 19251
Tssr72903 7 70357923 to 70357963 40 - TSS region transcription start site region 72903
Cpgi19252 7 70358804 to 70359203 399 CpG island CpG island 19252
Tssr72904 7 70359017 to 70359043 26 - TSS region transcription start site region 72904
Cpgi19253 7 70359656 to 70362381 2725 CpG island CpG island 19253
Tssr72905 7 70359931 to 70359948 17 - TSS region transcription start site region 72905
Tssr67166 7 70360524 to 70360540 16 + TSS region transcription start site region 67166
Tssr72906 7 70360731 to 70360746 15 - TSS region transcription start site region 72906
Tssr72907 7 70361425 to 70361437 12 - TSS region transcription start site region 72907
Tssr72908 7 70361455 to 70361464 9 - TSS region transcription start site region 72908
Tssr72909 7 70361514 to 70361523 9 - TSS region transcription start site region 72909
Tssr72910 7 70361528 to 70361549 21 - TSS region transcription start site region 72910
Tssr72911 7 70361571 to 70361576 5 - TSS region transcription start site region 72911
Tssr72912 7 70361578 to 70361583 5 - TSS region transcription start site region 72912
Tssr72913 7 70361597 to 70361611 14 - TSS region transcription start site region 72913
Tssr72914 7 70361634 to 70361684 50 - TSS region transcription start site region 72914
Tssr72915 7 70361700 to 70361707 7 - TSS region transcription start site region 72915
Tssr72916 7 70361723 to 70361748 25 - TSS region transcription start site region 72916
Tssr72917 7 70361750 to 70361777 27 - TSS region transcription start site region 72917
Tssr72918 7 70361797 to 70361810 13 - TSS region transcription start site region 72918
Tssr67167 7 70365081 to 70365102 21 + TSS region transcription start site region 67167
Tssr67168 7 70365260 to 70365263 3 + TSS region transcription start site region 67168
Tssr67169 7 70365349 to 70365361 12 + TSS region transcription start site region 67169
Tssr67170 7 70365375 to 70365399 24 + TSS region transcription start site region 67170
B130024G19Rik 7 70365383 to 70411146 45763 + lncRNA gene RIKEN cDNA B130024G19 gene
Cpgi19254 7 70365385 to 70365583 198 CpG island CpG island 19254
Tssr72919 7 70366146 to 70366163 17 - TSS region transcription start site region 72919
Tssr72920 7 70366348 to 70366416 68 - TSS region transcription start site region 72920
Tssr72921 7 70366425 to 70366466 41 - TSS region transcription start site region 72921
Tssr72922 7 70366517 to 70366564 47 - TSS region transcription start site region 72922
Tssr72923 7 70366736 to 70366771 35 - TSS region transcription start site region 72923
Tssr72924 7 70367042 to 70367051 9 - TSS region transcription start site region 72924
Cpgi19255 7 70369164 to 70370425 1261 CpG island CpG island 19255
Gm28258 7 70372023 to 70379741 7718 - lincRNA gene predicted gene 28258
Tssr67171 7 70381747 to 70381752 5 + TSS region transcription start site region 67171
Gm44532 7 70420915 to 70453222 32307 - lincRNA gene predicted gene 44532
Tssr72925 7 70453237 to 70453243 6 - TSS region transcription start site region 72925
Gm7656 7 70490848 to 70491851 1003 + pseudogene predicted gene 7656
Gm44811 7 70531222 to 70531449 227 + unclassified gene predicted gene 44811
Gm35842 7 70548869 to 70554924 6055 + lincRNA gene predicted gene, 35842
Gm44813 7 70571322 to 70574414 3092 + lincRNA gene predicted gene 44813
Gm44812 7 70574834 to 70585751 10917 + lincRNA gene predicted gene 44812
Gm35894 7 70586453 to 70589443 2990 - lncRNA gene predicted gene, 35894
Gm44809 7 70592890 to 70593882 992 + unclassified gene predicted gene 44809
Tssr67172 7 70606790 to 70606801 11 + TSS region transcription start site region 67172
Cpgi19256 7 70625391 to 70625660 269 CpG island CpG island 19256
Gm44808 7 70638610 to 70639917 1307 + lincRNA gene predicted gene 44808