Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:68228838-69009557

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igf1r 7 67952827 to 68233668 280841 + protein coding gene insulin-like growth factor I receptor
Tssr67121 7 68230295 to 68230302 7 + TSS region transcription start site region 67121
Pgpep1l 7 68236610 to 68264233 27623 - protein coding gene pyroglutamyl-peptidase I-like
Tssr72868 7 68249583 to 68249589 6 - TSS region transcription start site region 72868
Tssr72869 7 68250513 to 68250520 7 - TSS region transcription start site region 72869
Tssr67122 7 68250797 to 68250803 6 + TSS region transcription start site region 67122
Tssr67123 7 68263762 to 68263769 7 + TSS region transcription start site region 67123
Cpgi19236 7 68264046 to 68264459 413 CpG island CpG island 19236
Tssr72870 7 68264201 to 68264232 31 - TSS region transcription start site region 72870
Tssr72871 7 68264581 to 68264596 15 - TSS region transcription start site region 72871
Tssr72872 7 68264600 to 68264622 22 - TSS region transcription start site region 72872
Tssr72873 7 68264644 to 68264653 9 - TSS region transcription start site region 72873
Tssr67124 7 68264845 to 68264856 11 + TSS region transcription start site region 67124
Tssr72874 7 68265477 to 68265507 30 - TSS region transcription start site region 72874
Gm16157 7 68266339 to 68276594 10255 - antisense lncRNA gene predicted gene 16157
Fam169b 7 68273839 to 68363089 89250 + protein coding gene family with sequence similarity 169, member B
Tssr67125 7 68274517 to 68274522 5 + TSS region transcription start site region 67125
Tssr72875 7 68275107 to 68275120 13 - TSS region transcription start site region 72875
Tssr67126 7 68275868 to 68275879 11 + TSS region transcription start site region 67126
Tssr67127 7 68275964 to 68275966 2 + TSS region transcription start site region 67127
Tssr67128 7 68275970 to 68276025 55 + TSS region transcription start site region 67128
Cpgi19237 7 68275972 to 68276261 289 CpG island CpG island 19237
Tssr67129 7 68276108 to 68276134 26 + TSS region transcription start site region 67129
Tssr72876 7 68276253 to 68276264 11 - TSS region transcription start site region 72876
Tssr72877 7 68277059 to 68277102 43 - TSS region transcription start site region 72877
Tssr67130 7 68277530 to 68277539 9 + TSS region transcription start site region 67130
Tssr67131 7 68277747 to 68277755 8 + TSS region transcription start site region 67131
Tssr72878 7 68278718 to 68278740 22 - TSS region transcription start site region 72878
Tssr67132 7 68279166 to 68279181 15 + TSS region transcription start site region 67132
Tssr67133 7 68279196 to 68279201 5 + TSS region transcription start site region 67133
Tssr67134 7 68279203 to 68279209 6 + TSS region transcription start site region 67134
Tssr67135 7 68279217 to 68279226 9 + TSS region transcription start site region 67135
Tssr2296 7 68282696 to 68282705 9 - TSS region transcription start site region 2296
Tssr72879 7 68282718 to 68282733 15 - TSS region transcription start site region 72879
Tssr67136 7 68282906 to 68282931 25 + TSS region transcription start site region 67136
Tssr2297 7 68282951 to 68282958 7 + TSS region transcription start site region 2297
Tssr67137 7 68283803 to 68283805 2 + TSS region transcription start site region 67137
Tssr72880 7 68283811 to 68283821 10 - TSS region transcription start site region 72880
Tssr72881 7 68283839 to 68283868 29 - TSS region transcription start site region 72881
Tssr2298 7 68284145 to 68284169 24 + TSS region transcription start site region 2298
Tssr72882 7 68285943 to 68285952 9 - TSS region transcription start site region 72882
Tssr67138 7 68286133 to 68286153 20 + TSS region transcription start site region 67138
Tssr67139 7 68286166 to 68286178 12 + TSS region transcription start site region 67139
Tssr67140 7 68286182 to 68286206 24 + TSS region transcription start site region 67140
Tssr67141 7 68287121 to 68287130 9 + TSS region transcription start site region 67141
Tssr67142 7 68287180 to 68287203 23 + TSS region transcription start site region 67142
Tssr67143 7 68287420 to 68287438 18 + TSS region transcription start site region 67143
Tssr67144 7 68288209 to 68288219 10 + TSS region transcription start site region 67144
Tssr67145 7 68289476 to 68289480 4 + TSS region transcription start site region 67145
Tssr67146 7 68289546 to 68289550 4 + TSS region transcription start site region 67146
4930405G09Rik 7 68315973 to 68317032 1059 - unclassified gene RIKEN cDNA 4930405G09 gene
Cpgi19238 7 68318612 to 68318914 302 CpG island CpG island 19238
Tssr67147 7 68329244 to 68329284 40 + TSS region transcription start site region 67147
Gm44888 7 68332989 to 68335529 2540 + unclassified gene predicted gene 44888
Tssr67148 7 68338337 to 68338340 3 + TSS region transcription start site region 67148
Gm16158 7 68351384 to 68353581 2197 - antisense lncRNA gene predicted gene 16158
Tssr72883 7 68353196 to 68353221 25 - TSS region transcription start site region 72883
Tssr67149 7 68364104 to 68364110 6 + TSS region transcription start site region 67149
Gm44889 7 68384779 to 68392029 7250 + lincRNA gene predicted gene 44889
4933436H12Rik 7 68417424 to 68426133 8709 + lincRNA gene RIKEN cDNA 4933436H12 gene
Tssr67150 7 68418451 to 68418459 8 + TSS region transcription start site region 67150
Tssr67151 7 68433069 to 68433075 6 + TSS region transcription start site region 67151
Tssr67152 7 68433093 to 68433109 16 + TSS region transcription start site region 67152
Gm44886 7 68439373 to 68441722 2349 + lincRNA gene predicted gene 44886
Bwq11 7 68475206 to 68475345 139 QTL body weight QTL 11
D7Mit233 7 68475206 to 68475345 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 233
Eae43 7 68475206 to 68475345 139 QTL experimental allergic encephalomyelitis susceptibility 43
Gm34549 7 68488071 to 68490897 2826 + lincRNA gene predicted gene, 34549
Gm44887 7 68598677 to 68598854 177 - pseudogene predicted gene 44887
Tssr67153 7 68618433 to 68618446 13 + TSS region transcription start site region 67153
Tssr67154 7 68618452 to 68618464 12 + TSS region transcription start site region 67154
Gm5334 7 68618838 to 68619557 719 + pseudogene predicted pseudogene 5334
Gm44692 7 68719170 to 68726467 7297 - lincRNA gene predicted gene 44692
Arrdc4 7 68736994 to 68749238 12244 - protein coding gene arrestin domain containing 4
Tssr72884 7 68742629 to 68742643 14 - TSS region transcription start site region 72884
Tssr67155 7 68748193 to 68748220 27 + TSS region transcription start site region 67155
Cpgi19239 7 68748638 to 68749579 941 CpG island CpG island 19239
Tssr72885 7 68749170 to 68749233 63 - TSS region transcription start site region 72885
Tssr72886 7 68749242 to 68749251 9 - TSS region transcription start site region 72886
Tssr72887 7 68768328 to 68768332 4 - TSS region transcription start site region 72887
Gm34612 7 68792322 to 68818694 26372 + lncRNA gene predicted gene, 34612
Gm34664 7 68843099 to 68916016 72917 - lincRNA gene predicted gene, 34664
Tssr67156 7 68860242 to 68860249 7 + TSS region transcription start site region 67156
Tssr72888 7 68915989 to 68916016 27 - TSS region transcription start site region 72888
Gm23795 7 68952100 to 68952236 136 - snoRNA gene predicted gene, 23795
Tssr67157 7 68979441 to 68979452 11 + TSS region transcription start site region 67157
Gm44691 7 68989404 to 69008173 18769 + lincRNA gene predicted gene 44691