Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:67725226-68175230

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbthq1 7 62700000 to 68100000 5400000 QTL trabecular bone thickness QTL 1
Ttc23 7 67647319 to 67726577 79258 + protein coding gene tetratricopeptide repeat domain 23
Synm 7 67730161 to 67759742 29581 - protein coding gene synemin, intermediate filament protein
Tssr72860 7 67736524 to 67736547 23 - TSS region transcription start site region 72860
Tssr72861 7 67757621 to 67757626 5 - TSS region transcription start site region 72861
Cpgi19230 7 67758564 to 67760065 1501 CpG island CpG island 19230
Gm45102 7 67759317 to 67760173 856 + unclassified gene predicted gene 45102
Tssr72862 7 67759735 to 67759759 24 - TSS region transcription start site region 72862
Tssr72863 7 67759764 to 67759779 15 - TSS region transcription start site region 72863
Gm23844 7 67778410 to 67778530 120 - miRNA gene predicted gene, 23844
Gm7583 7 67782777 to 67783781 1004 - pseudogene predicted gene 7583
4833412C05Rik 7 67784538 to 67803496 18958 - lincRNA gene RIKEN cDNA 4833412C05 gene
Tssr72864 7 67803489 to 67803532 43 - TSS region transcription start site region 72864
Cpgi19231 7 67803539 to 67804280 741 CpG island CpG island 19231
D7Dcr29 7 67806655 to 67806746 91 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 29
Gm34350 7 67819250 to 67829618 10368 + lincRNA gene predicted gene, 34350
Gm39027 7 67832910 to 67849868 16958 - lincRNA gene predicted gene, 39027
Cpgi19232 7 67849151 to 67849514 363 CpG island CpG island 19232
Gm44666 7 67886195 to 67886585 390 - pseudogene predicted gene 44666
D7Mit277 7 67920759 to 67920927 168 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 277
Tssr67094 7 67937139 to 67937149 10 + TSS region transcription start site region 67094
Tssr67095 7 67950226 to 67950230 4 + TSS region transcription start site region 67095
Cpgi19233 7 67950535 to 67954076 3541 CpG island CpG island 19233
Tssr67096 7 67951769 to 67951772 3 + TSS region transcription start site region 67096
Tssr67097 7 67951857 to 67951910 53 + TSS region transcription start site region 67097
Tssr67098 7 67952004 to 67952065 61 + TSS region transcription start site region 67098
Tssr67099 7 67952082 to 67952092 10 + TSS region transcription start site region 67099
Tssr67100 7 67952369 to 67952428 59 + TSS region transcription start site region 67100
Tssr67101 7 67952435 to 67952450 15 + TSS region transcription start site region 67101
Tssr67102 7 67952817 to 67952828 11 + TSS region transcription start site region 67102
Igf1r 7 67952827 to 68233668 280841 + protein coding gene insulin-like growth factor I receptor
Tssr67103 7 67952877 to 67952922 45 + TSS region transcription start site region 67103
Tssr72865 7 67952949 to 67952958 9 - TSS region transcription start site region 72865
Cpgi19234 7 67958041 to 67958420 379 CpG island CpG island 19234
Tssr67104 7 67958326 to 67958330 4 + TSS region transcription start site region 67104
Tssr67105 7 67998217 to 67998220 3 + TSS region transcription start site region 67105
Tssr67106 7 68059103 to 68059107 4 + TSS region transcription start site region 67106
Tssr67107 7 68081139 to 68081144 5 + TSS region transcription start site region 67107
Tssr67108 7 68102299 to 68102303 4 + TSS region transcription start site region 67108
Tssr67109 7 68104155 to 68104159 4 + TSS region transcription start site region 67109
D930030O05Rik 7 68106694 to 68113354 6660 unclassified non-coding RNA gene RIKEN cDNA D930030O05 gene
Cpgi19235 7 68129135 to 68129416 281 CpG island CpG island 19235
Tssr67110 7 68133785 to 68133792 7 + TSS region transcription start site region 67110
Tssr67111 7 68133805 to 68133812 7 + TSS region transcription start site region 67111
Tssr2295 7 68133832 to 68133842 10 + TSS region transcription start site region 2295
Tssr67112 7 68148564 to 68148582 18 + TSS region transcription start site region 67112
Tssr67113 7 68148583 to 68148594 11 + TSS region transcription start site region 67113
Tssr67114 7 68148961 to 68148965 4 + TSS region transcription start site region 67114
Tssr72866 7 68149831 to 68149850 19 - TSS region transcription start site region 72866
Tssr72867 7 68157577 to 68157605 28 - TSS region transcription start site region 72867