Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:67390280-67900332

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr67078 7 67421270 to 67421300 30 + TSS region transcription start site region 67078
Tssr67079 7 67421330 to 67421346 16 + TSS region transcription start site region 67079
Gm33926 7 67428901 to 67440397 11496 - lincRNA gene predicted gene, 33926
Cpgi19227 7 67428943 to 67429236 293 CpG island CpG island 19227
Gm39025 7 67488011 to 67522791 34780 + lncRNA gene predicted gene, 39025
Tssr67080 7 67495063 to 67495067 4 + TSS region transcription start site region 67080
Lrrc28 7 67513410 to 67645268 131858 - protein coding gene leucine rich repeat containing 28
Rta1 7 67518279 to 89440781 21922502 QTL retinal aging 1
Gm34079 7 67524345 to 67543587 19242 + lncRNA gene predicted gene, 34079
Cpgi19228 7 67528922 to 67529110 188 CpG island CpG island 19228
Tssr72854 7 67528973 to 67528996 23 - TSS region transcription start site region 72854
Gm23233 7 67570567 to 67570703 136 - snoRNA gene predicted gene, 23233
Gm32983 7 67593659 to 67594163 504 + pseudogene predicted gene, 32983
Tssr72855 7 67619977 to 67619997 20 - TSS region transcription start site region 72855
Tssr72856 7 67620016 to 67620028 12 - TSS region transcription start site region 72856
Gm45100 7 67637765 to 67638155 390 + pseudogene predicted gene 45100
Cpgi19229 7 67644911 to 67645900 989 CpG island CpG island 19229
Tssr72857 7 67645195 to 67645273 78 - TSS region transcription start site region 72857
Tssr72858 7 67645280 to 67645332 52 - TSS region transcription start site region 72858
Tssr67081 7 67645429 to 67645461 32 + TSS region transcription start site region 67081
Tssr67082 7 67645469 to 67645506 37 + TSS region transcription start site region 67082
Ttc23 7 67647319 to 67726577 79258 + protein coding gene tetratricopeptide repeat domain 23
Tssr67083 7 67647405 to 67647456 51 + TSS region transcription start site region 67083
Tssr67084 7 67647458 to 67647482 24 + TSS region transcription start site region 67084
Tssr67085 7 67647484 to 67647557 73 + TSS region transcription start site region 67085
Tssr67086 7 67647570 to 67647583 13 + TSS region transcription start site region 67086
Tssr67087 7 67655146 to 67655181 35 + TSS region transcription start site region 67087
Tssr67088 7 67655414 to 67655442 28 + TSS region transcription start site region 67088
Tssr67089 7 67660856 to 67660904 48 + TSS region transcription start site region 67089
Tssr67090 7 67660916 to 67660923 7 + TSS region transcription start site region 67090
Tssr67091 7 67679053 to 67679070 17 + TSS region transcription start site region 67091
Tssr67092 7 67679107 to 67679117 10 + TSS region transcription start site region 67092
Tssr67093 7 67679248 to 67679261 13 + TSS region transcription start site region 67093
Gm44669 7 67679335 to 67681303 1968 - unclassified gene predicted gene 44669
Gm34140 7 67711491 to 67717180 5689 - lncRNA gene predicted gene, 34140
Tssr72859 7 67720184 to 67720189 5 - TSS region transcription start site region 72859
Synm 7 67730161 to 67759742 29581 - protein coding gene synemin, intermediate filament protein
Tssr72860 7 67736524 to 67736547 23 - TSS region transcription start site region 72860
Tssr72861 7 67757621 to 67757626 5 - TSS region transcription start site region 72861
Cpgi19230 7 67758564 to 67760065 1501 CpG island CpG island 19230
Gm45102 7 67759317 to 67760173 856 + unclassified gene predicted gene 45102
Tssr72862 7 67759735 to 67759759 24 - TSS region transcription start site region 72862
Tssr72863 7 67759764 to 67759779 15 - TSS region transcription start site region 72863
Gm23844 7 67778410 to 67778530 120 - miRNA gene predicted gene, 23844
Gm7583 7 67782777 to 67783781 1004 - pseudogene predicted gene 7583
4833412C05Rik 7 67784538 to 67803496 18958 - lincRNA gene RIKEN cDNA 4833412C05 gene
Tssr72864 7 67803489 to 67803532 43 - TSS region transcription start site region 72864
Cpgi19231 7 67803539 to 67804280 741 CpG island CpG island 19231
D7Dcr29 7 67806655 to 67806746 91 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 29
Gm34350 7 67819250 to 67829618 10368 + lincRNA gene predicted gene, 34350
Gm39027 7 67832910 to 67849868 16958 - lincRNA gene predicted gene, 39027
Cpgi19232 7 67849151 to 67849514 363 CpG island CpG island 19232
Gm44666 7 67886195 to 67886585 390 - pseudogene predicted gene 44666