Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:66780100-67580331

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cers3 7 66743504 to 66823691 80187 + protein coding gene ceramide synthase 3
Tssr67074 7 66822202 to 66822206 4 + TSS region transcription start site region 67074
Gm33627 7 66826685 to 66839791 13106 - lncRNA gene predicted gene, 33627
Cpgi19224 7 66839477 to 66840798 1321 CpG island CpG island 19224
Tssr67075 7 66839726 to 66839750 24 + TSS region transcription start site region 67075
Adamts17 7 66839735 to 67153171 313436 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
Tssr67076 7 66839752 to 66839770 18 + TSS region transcription start site region 67076
Gm44755 7 66959817 to 66961918 2101 - unclassified gene predicted gene 44755
Gm44609 7 66993968 to 66994427 459 - pseudogene predicted gene 44609
Tssr72830 7 67044307 to 67044331 24 - TSS region transcription start site region 72830
Tssr72831 7 67044334 to 67044344 10 - TSS region transcription start site region 72831
Gm17909 7 67082843 to 67083749 906 + pseudogene predicted gene, 17909
Tssr72832 7 67152721 to 67152757 36 - TSS region transcription start site region 72832
Tssr2292 7 67167278 to 67167282 4 + TSS region transcription start site region 2292
Gm45101 7 67180100 to 67180331 231 + pseudogene predicted gene 45101
1700112J16Rik 7 67204082 to 67222536 18454 - lincRNA gene RIKEN cDNA 1700112J16 gene
Tssr2293 7 67212387 to 67212390 3 + TSS region transcription start site region 2293
Cpgi19225 7 67222188 to 67222635 447 CpG island CpG island 19225
Tssr72833 7 67222412 to 67222434 22 - TSS region transcription start site region 72833
Lysmd4 7 67222544 to 67228468 5924 + protein coding gene LysM, putative peptidoglycan-binding, domain containing 4
Tssr67077 7 67222574 to 67222635 61 + TSS region transcription start site region 67077
Mef2a 7 67231163 to 67372858 141695 - protein coding gene myocyte enhancer factor 2A
Tssr72834 7 67234585 to 67234596 11 - TSS region transcription start site region 72834
Tssr72835 7 67239374 to 67239405 31 - TSS region transcription start site region 72835
Tssr72836 7 67255195 to 67255234 39 - TSS region transcription start site region 72836
Tssr72837 7 67255297 to 67255304 7 - TSS region transcription start site region 72837
Tssr72838 7 67266008 to 67266031 23 - TSS region transcription start site region 72838
Gm44667 7 67268906 to 67272242 3336 - unclassified gene predicted gene 44667
Tssr72839 7 67280595 to 67280612 17 - TSS region transcription start site region 72839
Tssr72840 7 67280638 to 67280666 28 - TSS region transcription start site region 72840
Tssr72841 7 67290951 to 67290996 45 - TSS region transcription start site region 72841
Tssr72842 7 67293462 to 67293465 3 - TSS region transcription start site region 72842
Tssr72843 7 67316831 to 67316841 10 - TSS region transcription start site region 72843
Tssr72844 7 67335250 to 67335254 4 - TSS region transcription start site region 72844
Tssr72845 7 67337406 to 67337436 30 - TSS region transcription start site region 72845
Tssr72846 7 67338534 to 67338538 4 - TSS region transcription start site region 72846
Tssr72847 7 67363448 to 67363452 4 - TSS region transcription start site region 72847
Gm44668 7 67367716 to 67370980 3264 - unclassified gene predicted gene 44668
Tssr72848 7 67370025 to 67370029 4 - TSS region transcription start site region 72848
Cpgi19226 7 67371991 to 67373704 1713 CpG island CpG island 19226
Tssr72849 7 67372772 to 67372845 73 - TSS region transcription start site region 72849
Tssr72850 7 67372846 to 67372857 11 - TSS region transcription start site region 72850
Tssr72851 7 67372862 to 67372871 9 - TSS region transcription start site region 72851
Tssr72852 7 67373096 to 67373126 30 - TSS region transcription start site region 72852
Tssr2294 7 67373160 to 67373178 18 + TSS region transcription start site region 2294
Tssr72853 7 67373192 to 67373244 52 - TSS region transcription start site region 72853
Tssr67078 7 67421270 to 67421300 30 + TSS region transcription start site region 67078
Tssr67079 7 67421330 to 67421346 16 + TSS region transcription start site region 67079
Gm33926 7 67428901 to 67440397 11496 - lincRNA gene predicted gene, 33926
Cpgi19227 7 67428943 to 67429236 293 CpG island CpG island 19227
Gm39025 7 67488011 to 67522791 34780 + lncRNA gene predicted gene, 39025
Tssr67080 7 67495063 to 67495067 4 + TSS region transcription start site region 67080
Lrrc28 7 67513410 to 67645268 131858 - protein coding gene leucine rich repeat containing 28
Rta1 7 67518279 to 89440781 21922502 QTL retinal aging 1
Gm34079 7 67524345 to 67543587 19242 + lncRNA gene predicted gene, 34079
Cpgi19228 7 67528922 to 67529110 188 CpG island CpG island 19228
Tssr72854 7 67528973 to 67528996 23 - TSS region transcription start site region 72854
Gm23233 7 67570567 to 67570703 136 - snoRNA gene predicted gene, 23233