Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:66158745-66488341

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chsy1	7	66109515 to 66173798	64283	+	protein coding gene	chondroitin sulfate synthase 1
Gm26827	7	66109515 to 66173121	63606	-	antisense lncRNA gene	predicted gene, 26827
Tssr67061	7	66172901 to 66172917	16	+	TSS region	transcription start site region 67061
Tssr67062	7	66174738 to 66174739	1	+	TSS region	transcription start site region 67062
Tssr67063	7	66176508 to 66176540	32	+	TSS region	transcription start site region 67063
Gm45080	7	66190555 to 66190837	282	+	pseudogene	predicted gene 45080
Tssr67064	7	66196138 to 66196177	39	+	TSS region	transcription start site region 67064
Gm33442	7	66254771 to 66277801	23030	+	lncRNA gene	predicted gene, 33442
Lrrk1	7	66258745 to 66388341	129596	-	protein coding gene	leucine-rich repeat kinase 1
Hfhl3	7	66281288 to 66281288	0		QTL	high-frequency hearing loss 3
Gm45989	7	66281726 to 66287433	5707	+	lncRNA gene	predicted gene, 45989
Gm44752	7	66309195 to 66312499	3304	+	antisense lncRNA gene	predicted gene 44752
Tssr67065	7	66324527 to 66324531	4	+	TSS region	transcription start site region 67065
Tssr72816	7	66332538 to 66332554	16	-	TSS region	transcription start site region 72816
Tssr72817	7	66337139 to 66337175	36	-	TSS region	transcription start site region 72817
Tssr72818	7	66337615 to 66337655	40	-	TSS region	transcription start site region 72818
D7Dcr28	7	66340062 to 66340165	103		DNA segment	DNA Segment, Chr 7, Derry C. Roopenian 28
Gm10974	7	66365905 to 66386309	20404	+	protein coding gene	predicted gene 10974
Gm23957	7	66370392 to 66370481	89	-	rRNA gene	predicted gene, 23957
Tssr72819	7	66377213 to 66377252	39	-	TSS region	transcription start site region 72819
Tssr72820	7	66378039 to 66378042	3	-	TSS region	transcription start site region 72820
Mir7057	7	66381667 to 66381724	57	-	miRNA gene	microRNA 7057
Cpgi19220	7	66387507 to 66388587	1080		CpG island	CpG island 19220
Tssr72821	7	66388286 to 66388341	55	-	TSS region	transcription start site region 72821
Aldh1a3	7	66390892 to 66427477	36585	-	protein coding gene	aldehyde dehydrogenase family 1, subfamily A3
Cpgi19221	7	66427024 to 66428188	1164		CpG island	CpG island 19221
Tssr72822	7	66427469 to 66427483	14	-	TSS region	transcription start site region 72822
Gm33515	7	66428647 to 66430494	1847	+	lncRNA gene	predicted gene, 33515
Gm44753	7	66441598 to 66444250	2652	+	lincRNA gene	predicted gene 44753