Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:65140889-65600900

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam189a1 7 64756091 to 65156564 400473 - protein coding gene family with sequence similarity 189, member A1
Cpgi19206 7 65155555 to 65157015 1460 CpG island CpG island 19206
Tssr72796 7 65156505 to 65156561 56 - TSS region transcription start site region 72796
Gm17908 7 65170639 to 65171894 1255 + pseudogene predicted gene, 17908
Gm17918 7 65173618 to 65174191 573 - pseudogene predicted gene, 17918
1810049I09Rik 7 65212814 to 65213429 615 - lincRNA gene RIKEN cDNA 1810049I09 gene
Tssr72797 7 65213364 to 65213373 9 - TSS region transcription start site region 72797
Tssr72798 7 65213397 to 65213442 45 - TSS region transcription start site region 72798
Tssr72799 7 65213444 to 65213449 5 - TSS region transcription start site region 72799
Cpgi19207 7 65279316 to 65279544 228 CpG island CpG island 19207
Cpgi19208 7 65282850 to 65283129 279 CpG island CpG island 19208
Tjp1 7 65296165 to 65527781 231616 - protein coding gene tight junction protein 1
Tssr72800 7 65313977 to 65313981 4 - TSS region transcription start site region 72800
D130061D10Rik 7 65331319 to 65334295 2976 unclassified gene RIKEN cDNA D130061D10 gene
Tssr72801 7 65338357 to 65338362 5 - TSS region transcription start site region 72801
Tssr72802 7 65347554 to 65347557 3 - TSS region transcription start site region 72802
Tssr72803 7 65364202 to 65364206 4 - TSS region transcription start site region 72803
Gm44794 7 65366372 to 65366782 410 - unclassified gene predicted gene 44794
Cpgi19209 7 65370363 to 65371594 1231 CpG island CpG island 19209
Tssr72804 7 65370874 to 65370884 10 - TSS region transcription start site region 72804
Tssr72805 7 65370889 to 65370900 11 - TSS region transcription start site region 72805
Tssr72806 7 65370908 to 65370948 40 - TSS region transcription start site region 72806
Tssr72807 7 65371210 to 65371287 77 - TSS region transcription start site region 72807
Tssr67032 7 65371422 to 65371433 11 + TSS region transcription start site region 67032
Gm33068 7 65371642 to 65374397 2755 + lncRNA gene predicted gene, 33068
Cpgi19210 7 65393832 to 65394205 373 CpG island CpG island 19210
Gm44795 7 65401847 to 65402165 318 + pseudogene predicted gene 44795
Cpgi19211 7 65423796 to 65424001 205 CpG island CpG island 19211
Tssr72808 7 65452908 to 65452911 3 - TSS region transcription start site region 72808
Tssr2288 7 65472206 to 65472209 3 + TSS region transcription start site region 2288
Gm44792 7 65479594 to 65481221 1627 - unclassified gene predicted gene 44792
Cpgi19212 7 65526982 to 65528076 1094 CpG island CpG island 19212
Tssr72809 7 65527734 to 65527838 104 - TSS region transcription start site region 72809
Gm7546 7 65579998 to 65635913 55915 - pseudogene predicted gene 7546
D7Mit195.2 7 65581235 to 65581346 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 195.2
D7Mit195 7 65581318 to 65581438 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 195
BC046251 7 65582070 to 65618884 36814 + lincRNA gene cDNA sequence BC046251
D7Mit161 7 65584566 to 65584672 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 161