Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:6417219-6727436

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20715 7 6410277 to 6441691 31414 + protein coding gene predicted gene 20715
Smim17 7 6415175 to 6431086 15911 + protein coding gene small integral membrane protein 17
D7Mit363 7 6436466 to 6436615 149 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 363
Olfr1344 7 6439902 to 6440867 965 + protein coding gene olfactory receptor 1344
Cpgi18296 7 6440018 to 6440563 545 CpG island CpG island 18296
Olfr1345-ps1 7 6446874 to 6447117 243 + pseudogene olfactory receptor 1345, pseudogene 1
Tssr64453 7 6460222 to 6460227 5 + TSS region transcription start site region 64453
Olfr1336 7 6460511 to 6461455 944 + protein coding gene olfactory receptor 1336
Olfr1346 7 6474112 to 6475053 941 + protein coding gene olfactory receptor 1346
Olfr5 7 6480216 to 6487115 6899 - protein coding gene olfactory receptor 5
Olfr1347 7 6487913 to 6488872 959 - protein coding gene olfactory receptor 1347
Olfr1348 7 6501286 to 6502224 938 - protein coding gene olfactory receptor 1348
n-R5s150 7 6512235 to 6512342 107 + rRNA gene nuclear encoded rRNA 5S 150
Olfr1349 7 6514199 to 6520355 6156 - protein coding gene olfactory receptor 1349
Cpgi18297 7 6514787 to 6515459 672 CpG island CpG island 18297
Gm7587 7 6533491 to 6534511 1020 - pseudogene predicted gene 7587
Olfr1350 7 6569993 to 6570919 926 + protein coding gene olfactory receptor 1350
D7Mit75 7 6572219 to 6572436 217 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 75
Zim2 7 6651748 to 6662368 10620 - lncRNA gene zinc finger, imprinted 2
Tssr70587 7 6662338 to 6662345 7 - TSS region transcription start site region 70587
1110014L15Rik 7 6671268 to 6672887 1619 unclassified non-coding RNA gene RIKEN cDNA 1110014L15 gene
Zim1 7 6674444 to 6696541 22097 - protein coding gene zinc finger, imprinted 1
Cpgi18298 7 6677287 to 6677892 605 CpG island CpG island 18298
Tssr70588 7 6678246 to 6678250 4 - TSS region transcription start site region 70588
Tssr70589 7 6685299 to 6685323 24 - TSS region transcription start site region 70589
Tssr70590 7 6685454 to 6685513 59 - TSS region transcription start site region 70590
Tssr70591 7 6685519 to 6685539 20 - TSS region transcription start site region 70591
Tssr70592 7 6685608 to 6685619 11 - TSS region transcription start site region 70592
Tssr70593 7 6689496 to 6689507 11 - TSS region transcription start site region 70593
Tssr70594 7 6690867 to 6690886 19 - TSS region transcription start site region 70594
Tssr70595 7 6691140 to 6691160 20 - TSS region transcription start site region 70595
Tssr70596 7 6691162 to 6691176 14 - TSS region transcription start site region 70596
Tssr70597 7 6691213 to 6691225 12 - TSS region transcription start site region 70597
Tssr70598 7 6691308 to 6691319 11 - TSS region transcription start site region 70598
D7Mit244 7 6691973 to 6692105 132 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 244
Cpgi18299 7 6696247 to 6696694 447 CpG island CpG island 18299
Tssr70599 7 6696423 to 6696456 33 - TSS region transcription start site region 70599
Peg3 7 6703892 to 6730431 26539 - protein coding gene paternally expressed 3
Tssr70600 7 6706308 to 6706324 16 - TSS region transcription start site region 70600
Tssr70601 7 6706410 to 6706422 12 - TSS region transcription start site region 70601
Tssr70602 7 6706611 to 6706626 15 - TSS region transcription start site region 70602
Peg3os 7 6706760 to 6707624 864 + antisense lncRNA gene Peg3 opposite strand
Tssr70603 7 6707554 to 6707570 16 - TSS region transcription start site region 70603
Tssr70604 7 6708747 to 6708769 22 - TSS region transcription start site region 70604
Tssr70605 7 6709642 to 6709658 16 - TSS region transcription start site region 70605
Tssr70606 7 6709979 to 6709990 11 - TSS region transcription start site region 70606
Cpgi18300 7 6710638 to 6710944 306 CpG island CpG island 18300
Tssr64454 7 6717831 to 6717860 29 + TSS region transcription start site region 64454