Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:63888916-64418923

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klf13 7 63886351 to 63938915 52564 - protein coding gene Kruppel-like factor 13
Tssr2284 7 63889100 to 63889116 16 - TSS region transcription start site region 2284
Tssr72766 7 63891424 to 63891529 105 - TSS region transcription start site region 72766
Cpgi19191 7 63891446 to 63891985 539 CpG island CpG island 19191
Tssr66984 7 63896379 to 63896392 13 + TSS region transcription start site region 66984
Tssr66985 7 63896477 to 63896499 22 + TSS region transcription start site region 66985
Tssr2285 7 63896502 to 63896514 12 + TSS region transcription start site region 2285
Gm27252 7 63896533 to 63899698 3165 + lncRNA gene predicted gene 27252
Cpgi19192 7 63896806 to 63897280 474 CpG island CpG island 19192
Tssr66986 7 63897396 to 63897425 29 + TSS region transcription start site region 66986
Gm45987 7 63901722 to 63909189 7467 - lncRNA gene predicted gene, 45987
Tssr66987 7 63905470 to 63905483 13 + TSS region transcription start site region 66987
Tssr72767 7 63908587 to 63908610 23 - TSS region transcription start site region 72767
E030018B13Rik 7 63916857 to 63920539 3682 + protein coding gene RIKEN cDNA E030018B13 gene
Tssr66988 7 63916880 to 63916916 36 + TSS region transcription start site region 66988
Tssr66989 7 63917241 to 63917248 7 + TSS region transcription start site region 66989
Tssr72768 7 63918971 to 63918978 7 - TSS region transcription start site region 72768
Tssr72769 7 63923414 to 63923418 4 - TSS region transcription start site region 72769
Tssr72770 7 63929350 to 63929354 4 - TSS region transcription start site region 72770
Cpgi19193 7 63936279 to 63936522 243 CpG island CpG island 19193
Tssr72771 7 63936309 to 63936342 33 - TSS region transcription start site region 72771
Tssr66990 7 63936626 to 63936636 10 + TSS region transcription start site region 66990
Tssr66991 7 63936685 to 63936695 10 + TSS region transcription start site region 66991
Cpgi19194 7 63936937 to 63939924 2987 CpG island CpG island 19194
Tssr72772 7 63937239 to 63937245 6 - TSS region transcription start site region 72772
Tssr72773 7 63937684 to 63937711 27 - TSS region transcription start site region 72773
Tssr66992 7 63937771 to 63937811 40 + TSS region transcription start site region 66992
Tssr72774 7 63938364 to 63938378 14 - TSS region transcription start site region 72774
Tssr72775 7 63938542 to 63938632 90 - TSS region transcription start site region 72775
Tssr2286 7 63938797 to 63938807 10 - TSS region transcription start site region 2286
Tssr72776 7 63938843 to 63938856 13 - TSS region transcription start site region 72776
Tssr72777 7 63938862 to 63938933 71 - TSS region transcription start site region 72777
Tssr72778 7 63938990 to 63939046 56 - TSS region transcription start site region 72778
Tssr66993 7 63939220 to 63939275 55 + TSS region transcription start site region 66993
Tssr66994 7 63939319 to 63939345 26 + TSS region transcription start site region 66994
Tssr72779 7 63939688 to 63939707 19 - TSS region transcription start site region 72779
Tssr72780 7 63939710 to 63939724 14 - TSS region transcription start site region 72780
Gm44627 7 63948678 to 63950208 1530 + unclassified gene predicted gene 44627
Gm39024 7 63956388 to 63959355 2967 + lncRNA gene predicted gene, 39024
Gm45052 7 63962240 to 63967744 5504 + lincRNA gene predicted gene 45052
Tssr72781 7 63999223 to 63999228 5 - TSS region transcription start site region 72781
Tssr72782 7 64001774 to 64001788 14 - TSS region transcription start site region 72782
Tssr66995 7 64001873 to 64001887 14 + TSS region transcription start site region 66995
Gm32633 7 64001885 to 64020959 19074 + lincRNA gene predicted gene, 32633
Tssr66996 7 64001898 to 64001924 26 + TSS region transcription start site region 66996
Gm45054 7 64034246 to 64040826 6580 - lincRNA gene predicted gene 45054
Cpgi19195 7 64048600 to 64049029 429 CpG island CpG island 19195
D7Mit316 7 64051451 to 64051574 123 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 316
Tssr72783 7 64052585 to 64052606 21 - TSS region transcription start site region 72783
Gm32902 7 64057290 to 64057807 517 - lncRNA gene predicted gene, 32902
Gm20670 7 64057602 to 64062958 5356 + lincRNA gene predicted gene 20670
Tssr72784 7 64058678 to 64058720 42 - TSS region transcription start site region 72784
D7Mit89 7 64061378 to 64061522 144 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 89
Cpgi19196 7 64065649 to 64065844 195 CpG island CpG island 19196
Gm45988 7 64130874 to 64134371 3497 + protein coding gene predicted gene, 45988
Trpm1 7 64153835 to 64269772 115937 + protein coding gene transient receptor potential cation channel, subfamily M, member 1
Tssr66997 7 64153841 to 64153851 10 + TSS region transcription start site region 66997
Tssr66998 7 64153862 to 64153865 3 + TSS region transcription start site region 66998
Tssr66999 7 64153916 to 64153923 7 + TSS region transcription start site region 66999
Tssr67000 7 64153942 to 64153949 7 + TSS region transcription start site region 67000
Tssr67001 7 64158953 to 64158961 8 + TSS region transcription start site region 67001
Tssr67002 7 64185406 to 64185422 16 + TSS region transcription start site region 67002
Tssr67003 7 64185495 to 64185506 11 + TSS region transcription start site region 67003
Tssr67004 7 64185537 to 64185560 23 + TSS region transcription start site region 67004
Cpgi19197 7 64201848 to 64202066 218 CpG island CpG island 19197
Gm44722 7 64202089 to 64202524 435 - unclassified gene predicted gene 44722
Mir211 7 64205806 to 64205911 105 + miRNA gene microRNA 211
Tssr67005 7 64205889 to 64205892 3 + TSS region transcription start site region 67005
Gm44719 7 64213190 to 64213338 148 + unclassified gene predicted gene 44719
Tssr67006 7 64226579 to 64226584 5 + TSS region transcription start site region 67006
Cpgi19198 7 64226746 to 64226899 153 CpG island CpG island 19198
Mir6416 7 64249983 to 64250099 116 - miRNA gene microRNA 6416
Cpgi19199 7 64268077 to 64268900 823 CpG island CpG island 19199
Gm44765 7 64283800 to 64284400 600 + unclassified gene predicted gene 44765
Gm45212 7 64284808 to 64288210 3402 - unclassified gene predicted gene 45212
Cpgi19200 7 64287255 to 64288201 946 CpG island CpG island 19200
Tssr67007 7 64287469 to 64287503 34 + TSS region transcription start site region 67007
Tssr72785 7 64287554 to 64287564 10 - TSS region transcription start site region 72785
Tssr67008 7 64287653 to 64287662 9 + TSS region transcription start site region 67008
Tssr67009 7 64287665 to 64287676 11 + TSS region transcription start site region 67009
Mtmr10 7 64287670 to 64340806 53136 + protein coding gene myotubularin related protein 10
Tssr67010 7 64287677 to 64287715 38 + TSS region transcription start site region 67010
Tssr67011 7 64287728 to 64287749 21 + TSS region transcription start site region 67011
Gm20457 7 64337550 to 64345964 8414 - antisense lncRNA gene predicted gene 20457
Tssr72786 7 64345394 to 64345428 34 - TSS region transcription start site region 72786
Fan1 7 64346758 to 64374095 27337 - protein coding gene FANCD2/FANCI-associated nuclease 1
Gm17930 7 64356778 to 64357477 699 - pseudogene predicted gene, 17930
Tssr72787 7 64373595 to 64373599 4 - TSS region transcription start site region 72787
Cpgi19201 7 64373824 to 64374243 419 CpG island CpG island 19201
Tssr72788 7 64374026 to 64374069 43 - TSS region transcription start site region 72788
Tssr72789 7 64374071 to 64374109 38 - TSS region transcription start site region 72789
Mphosph10 7 64376541 to 64392236 15695 - protein coding gene M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
Cpgi19202 7 64391940 to 64393049 1109 CpG island CpG island 19202
Tssr72790 7 64392196 to 64392205 9 - TSS region transcription start site region 72790
Tssr72791 7 64392214 to 64392259 45 - TSS region transcription start site region 72791
Mcee 7 64392612 to 64412121 19509 + protein coding gene methylmalonyl CoA epimerase
Tssr67012 7 64392720 to 64392731 11 + TSS region transcription start site region 67012
Tssr67013 7 64392736 to 64392763 27 + TSS region transcription start site region 67013
Tssr67014 7 64392766 to 64392790 24 + TSS region transcription start site region 67014