Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:60137922-61746385

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Ube3a-Snrpn)1Alb 7 59228750 to 60140219 911469 complex/cluster/region Deletion, Chr 7, Beaudet 1
Snrpn 7 59982502 to 60140219 157717 - protein coding gene small nuclear ribonucleoprotein N
Tssr66972 7 60145438 to 60145446 8 + TSS region transcription start site region 66972
Cpgi19177 7 60155493 to 60156062 569 CpG island CpG island 19177
Gm7367 7 60155609 to 60156100 491 + pseudogene predicted pseudogene 7367
Tssr66973 7 60155682 to 60155722 40 + TSS region transcription start site region 66973
Tssr72714 7 60216836 to 60216858 22 - TSS region transcription start site region 72714
Gm18129 7 60272860 to 60280211 7351 + pseudogene predicted gene, 18129
Gm39021 7 60280103 to 60284618 4515 - lncRNA gene predicted gene, 39021
Gm30196 7 60293204 to 60293363 159 + pseudogene predicted gene, 30196
D7Mit249.2a 7 60303174 to 60303293 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 249.2a
D7Mit249.2b 7 60410345 to 60410465 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 249.2b
Gm42394 7 60437689 to 60444043 6354 - lncRNA gene predicted gene, 42394
Cpgi19178 7 60492462 to 60492654 192 CpG island CpG island 19178
Gm3198 7 60643891 to 60645785 1894 + pseudogene predicted gene 3198
Gm10297 7 60753363 to 60754004 641 - pseudogene predicted pseudogene 10297
Gm7394 7 60754882 to 60756779 1897 + pseudogene predicted gene 7394
Gm29729 7 60833596 to 60922937 89341 - lncRNA gene predicted gene, 29729
3110018A10Rik 7 60856526 to 60857259 733 unclassified gene RIKEN cDNA 3110018A10 gene
Gm44644 7 60915550 to 60922910 7360 - lincRNA gene predicted gene 44644
Gm44643 7 60922922 to 60961385 38463 - lincRNA gene predicted gene 44643
Gm30829 7 60923152 to 60961459 38307 - lncRNA gene predicted gene, 30829
Tssr72715 7 60939874 to 60939889 15 - TSS region transcription start site region 72715
A230006K03Rik 7 61010264 to 61090414 80150 - lincRNA gene RIKEN cDNA A230006K03 gene
Tssr72716 7 61055404 to 61055418 14 - TSS region transcription start site region 72716
Tssr66974 7 61115092 to 61115095 3 + TSS region transcription start site region 66974
Gm38451 7 61128039 to 61130684 2645 - lncRNA gene predicted gene, 38451
Gm31445 7 61197065 to 61311768 114703 - protein coding gene predicted gene, 31445
Tssr72717 7 61311640 to 61311655 15 - TSS region transcription start site region 72717
Tssr72718 7 61311662 to 61311667 5 - TSS region transcription start site region 72718
Tssr72719 7 61311679 to 61311690 11 - TSS region transcription start site region 72719
Gm31652 7 61329639 to 61336236 6597 - lncRNA gene predicted gene, 31652
Tssr72720 7 61528840 to 61528847 7 - TSS region transcription start site region 72720
B230209E15Rik 7 61529871 to 61615327 85456 - lincRNA gene RIKEN cDNA B230209E15 gene
Tssr72721 7 61529884 to 61529895 11 - TSS region transcription start site region 72721
Tssr72722 7 61529949 to 61529985 36 - TSS region transcription start site region 72722
Tssr72723 7 61530059 to 61530099 40 - TSS region transcription start site region 72723
Tssr72724 7 61530120 to 61530134 14 - TSS region transcription start site region 72724
Tssr72725 7 61530179 to 61530188 9 - TSS region transcription start site region 72725
Tssr72726 7 61546183 to 61546194 11 - TSS region transcription start site region 72726
Ube2nl 7 61549246 to 61549701 455 - pseudogene ubiquitin-conjugating enzyme E2N-like
Tssr72727 7 61563150 to 61563153 3 - TSS region transcription start site region 72727
Tssr72728 7 61576790 to 61576801 11 - TSS region transcription start site region 72728
Tssr72729 7 61595838 to 61595839 1 - TSS region transcription start site region 72729
Tssr72730 7 61604642 to 61604655 13 - TSS region transcription start site region 72730
Tssr72731 7 61615287 to 61615301 14 - TSS region transcription start site region 72731
Tssr72732 7 61615322 to 61615349 27 - TSS region transcription start site region 72732
Gm25533 7 61673829 to 61673907 78 - miRNA gene predicted gene, 25533
Gm23962 7 61681515 to 61681594 79 - miRNA gene predicted gene, 23962
Mir344d-1 7 61683124 to 61683192 68 - miRNA gene microRNA 344d-1
Mir344d-2 7 61685272 to 61685351 79 - miRNA gene microRNA 344d-2
A230057D06Rik 7 61705850 to 61927574 221724 - lincRNA gene RIKEN cDNA A230057D06 gene
Gm23490 7 61706591 to 61706670 79 - miRNA gene predicted gene, 23490
Gm22466 7 61708705 to 61708773 68 - miRNA gene predicted gene, 22466
Mir344d-3 7 61726249 to 61726328 79 - miRNA gene microRNA 344d-3
Tssr66975 7 61732753 to 61732762 9 + TSS region transcription start site region 66975
Gm23917 7 61733685 to 61733782 97 - miRNA gene predicted gene, 23917
Mir344e 7 61735537 to 61735602 65 - miRNA gene microRNA 344e
Mir344h-1 7 61739350 to 61739409 59 - miRNA gene microRNA 344h-1
Mir344h-2 7 61742366 to 61742425 59 - miRNA gene microRNA 344h-2