Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:59887600-60307627

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Ube3a-Snrpn)1Alb 7 59228750 to 60140219 911469 complex/cluster/region Deletion, Chr 7, Beaudet 1
Snord116l4 7 59889593 to 59889686 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 4
Snord116l3 7 59892111 to 59892204 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 3
Snord116l1 7 59894622 to 59894711 89 - snoRNA gene small nucleolar RNA, C/D box 116-like 1
Snord116l9 7 59897161 to 59897254 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 9
Snord116l10 7 59899687 to 59899780 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 10
Snord116l11 7 59902213 to 59902306 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 11
Snord116l12 7 59904755 to 59904848 93 - snoRNA gene small nucleolar RNA, C/D box 116-like 12
Tssr72690 7 59922606 to 59922624 18 - TSS region transcription start site region 72690
Gm22373 7 59923034 to 59923122 88 - snoRNA gene predicted gene, 22373
Tssr72691 7 59930800 to 59930811 11 - TSS region transcription start site region 72691
Tssr72692 7 59930828 to 59930840 12 - TSS region transcription start site region 72692
Tssr72693 7 59961999 to 59962014 15 - TSS region transcription start site region 72693
Snhg14 7 59969577 to 59974431 4854 - lncRNA gene small nucleolar RNA host gene 14
Gm38393 7 59974149 to 60005064 30915 - protein coding gene predicted gene, 38393
Tssr72694 7 59976554 to 59976565 11 - TSS region transcription start site region 72694
Tssr72695 7 59977610 to 59977614 4 - TSS region transcription start site region 72695
Tssr72696 7 59977725 to 59977738 13 - TSS region transcription start site region 72696
Snord64 7 59978811 to 59978856 45 - snoRNA gene small nucleolar RNA, C/D box 64
Tssr72697 7 59978870 to 59978874 4 - TSS region transcription start site region 72697
Snord107 7 59980876 to 59980945 69 - snoRNA gene small nucleolar RNA, C/D box 107
Tssr72698 7 59980934 to 59980947 13 - TSS region transcription start site region 72698
Snrpn 7 59982502 to 60140219 157717 - protein coding gene small nuclear ribonucleoprotein N
Tssr72699 7 59983427 to 59983441 14 - TSS region transcription start site region 72699
Tssr72700 7 59984792 to 59984796 4 - TSS region transcription start site region 72700
Tssr72701 7 59988667 to 59988687 20 - TSS region transcription start site region 72701
Snurf 7 59995449 to 60005049 9600 - protein coding gene SNRPN upstream reading frame
Tssr72702 7 60002983 to 60002995 12 - TSS region transcription start site region 72702
Tssr72703 7 60003061 to 60003090 29 - TSS region transcription start site region 72703
Tssr72704 7 60003138 to 60003156 18 - TSS region transcription start site region 72704
Tssr72705 7 60003164 to 60003186 22 - TSS region transcription start site region 72705
Tssr66968 7 60003689 to 60003698 9 + TSS region transcription start site region 66968
Tssr72706 7 60003966 to 60003994 28 - TSS region transcription start site region 72706
Cpgi19176 7 60004308 to 60005228 920 CpG island CpG island 19176
Tssr66969 7 60004421 to 60004434 13 + TSS region transcription start site region 66969
Tssr72707 7 60005079 to 60005086 7 - TSS region transcription start site region 72707
Tssr72708 7 60005101 to 60005151 50 - TSS region transcription start site region 72708
Tssr72709 7 60005152 to 60005159 7 - TSS region transcription start site region 72709
Tssr2280 7 60005173 to 60005182 9 - TSS region transcription start site region 2280
Tssr66970 7 60037011 to 60037018 7 + TSS region transcription start site region 66970
Tssr66971 7 60037032 to 60037040 8 + TSS region transcription start site region 66971
Tssr72710 7 60046940 to 60046943 3 - TSS region transcription start site region 72710
Tssr72711 7 60047951 to 60047968 17 - TSS region transcription start site region 72711
Tssr72712 7 60047973 to 60047984 11 - TSS region transcription start site region 72712
Tssr72713 7 60097600 to 60097627 27 - TSS region transcription start site region 72713
Gm18908 7 60132202 to 60133684 1482 + pseudogene predicted gene, 18908
Tssr66972 7 60145438 to 60145446 8 + TSS region transcription start site region 66972
Cpgi19177 7 60155493 to 60156062 569 CpG island CpG island 19177
Gm7367 7 60155609 to 60156100 491 + pseudogene predicted pseudogene 7367
Tssr66973 7 60155682 to 60155722 40 + TSS region transcription start site region 66973
Tssr72714 7 60216836 to 60216858 22 - TSS region transcription start site region 72714
Gm18129 7 60272860 to 60280211 7351 + pseudogene predicted gene, 18129
Gm39021 7 60280103 to 60284618 4515 - lncRNA gene predicted gene, 39021
Gm30196 7 60293204 to 60293363 159 + pseudogene predicted gene, 30196
D7Mit249.2a 7 60303174 to 60303293 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 249.2a