Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:5945161-6205149

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn1r-ps46	7	5966268 to 5967216	948	-	pseudogene	vomeronasal 1 receptor, pseudogene 46
Vmn1r65	7	6007750 to 6011010	3260	-	protein coding gene	vomeronasal 1 receptor 65
Tssr64431	7	6018978 to 6018979	1	+	TSS region	transcription start site region 64431
Gm5321	7	6019022 to 6019468	446	+	pseudogene	predicted gene 5321
Gm5052	7	6022661 to 6023168	507	-	pseudogene	predicted gene 5052
Gm38420	7	6038752 to 6039303	551	+	pseudogene	predicted gene, 38420
4933402C05Rik	7	6039107 to 6042555	3448	+	lincRNA gene	RIKEN cDNA 4933402C05 gene
Gm44733	7	6040816 to 6042950	2134	-	lincRNA gene	predicted gene 44733
Nlrp4c	7	6045161 to 6105149	59988	+	protein coding gene	NLR family, pyrin domain containing 4C
Tssr64432	7	6045168 to 6045197	29	+	TSS region	transcription start site region 64432
Gm18758	7	6116724 to 6124731	8007	+	pseudogene	predicted gene, 18758
Zfp787	7	6131491 to 6155997	24506	-	protein coding gene	zinc finger protein 787
Cpgi18282	7	6131980 to 6133147	1167		CpG island	CpG island 18282
4933431C10Rik	7	6136430 to 6137695	1265	+	unclassified gene	RIKEN cDNA 4933431C10 gene
Cpgi18283	7	6154979 to 6156577	1598		CpG island	CpG island 18283
Gm45841	7	6155287 to 6155450	163	-	unclassified gene	predicted gene 45841
Tssr64433	7	6155294 to 6155308	14	+	TSS region	transcription start site region 64433
Tssr64434	7	6155800 to 6155811	11	+	TSS region	transcription start site region 64434
Tssr70581	7	6155939 to 6155970	31	-	TSS region	transcription start site region 70581
Tssr70582	7	6156166 to 6156200	34	-	TSS region	transcription start site region 70582
Gm36371	7	6156516 to 6157618	1102	+	bidirectional promoter lncRNA gene	predicted gene, 36371
Tssr70583	7	6168591 to 6168602	11	-	TSS region	transcription start site region 70583
Cpgi18284	7	6171430 to 6173168	1738		CpG island	CpG island 18284
Zfp444	7	6172464 to 6193104	20640	+	protein coding gene	zinc finger protein 444
Tssr64435	7	6172496 to 6172531	35	+	TSS region	transcription start site region 64435
Tssr64436	7	6172533 to 6172556	23	+	TSS region	transcription start site region 64436
Tssr70584	7	6173102 to 6173130	28	-	TSS region	transcription start site region 70584
Gm45148	7	6179975 to 6183561	3586	+	sense intronic lncRNA gene	predicted gene 45148
Cpgi18285	7	6183877 to 6184218	341		CpG island	CpG island 18285
Cpgi18286	7	6189258 to 6190029	771		CpG island	CpG island 18286
Tssr64437	7	6191224 to 6191228	4	+	TSS region	transcription start site region 64437
Galp	7	6197090 to 6216137	19047	+	protein coding gene	galanin-like peptide
Cpgi18287	7	6202470 to 6202807	337		CpG island	CpG island 18287