Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:58828127-59629792

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188 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Gabrb3-Ube3a)1Yhj 7 57590518 to 59306733 1716215 chromosomal deletion deletion, Chr 7, Yong-hui Jiang 1
Atp10a 7 58656166 to 58829420 173254 + protein coding gene ATPase, class V, type 10A
Gm6226 7 58836796 to 58837938 1142 - pseudogene predicted gene 6226
Cpgi19174 7 58836843 to 58837154 311 CpG island CpG island 19174
Gm39020 7 58842545 to 59081916 239371 + lncRNA gene predicted gene, 39020
Gm44938 7 58926564 to 58927790 1226 + pseudogene predicted gene 44938
Gm18453 7 58948934 to 58949559 625 - pseudogene predicted gene, 18453
Gm9373 7 58951578 to 58952176 598 + pseudogene predicted gene 9373
Gm9375 7 58970237 to 58971139 902 + pseudogene predicted gene 9375
Gm45189 7 59109139 to 59109501 362 + pseudogene predicted gene 45189
Gm9377 7 59109920 to 59110542 622 + pseudogene predicted gene 9377
Gm44743 7 59171529 to 59171914 385 + pseudogene predicted gene 44743
D7Mit296 7 59176325 to 59176449 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 296
D7Mit84 7 59199186 to 59199354 168 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 84
Gm44742 7 59202391 to 59203802 1411 - unclassified gene predicted gene 44742
Tssr72678 7 59217666 to 59217695 29 - TSS region transcription start site region 72678
9330162G02Rik 7 59223847 to 59254788 30941 - unclassified non-coding RNA gene RIKEN cDNA 9330162G02 gene
Cpgi19175 7 59228127 to 59229792 1665 CpG island CpG island 19175
Tssr72679 7 59228529 to 59228551 22 - TSS region transcription start site region 72679
Tssr66955 7 59228743 to 59228769 26 + TSS region transcription start site region 66955
Del(7Ube3a-Snrpn)1Alb 7 59228750 to 60140219 911469 complex/cluster/region Deletion, Chr 7, Beaudet 1
Ube3a 7 59228750 to 59306733 77983 + protein coding gene ubiquitin protein ligase E3A
Tssr66956 7 59228771 to 59228782 11 + TSS region transcription start site region 66956
Tssr66957 7 59228784 to 59228824 40 + TSS region transcription start site region 66957
Tssr66958 7 59228953 to 59228967 14 + TSS region transcription start site region 66958
Tssr66959 7 59228996 to 59229021 25 + TSS region transcription start site region 66959
Tssr66960 7 59229031 to 59229051 20 + TSS region transcription start site region 66960
Tssr66961 7 59229422 to 59229442 20 + TSS region transcription start site region 66961
Tssr66962 7 59231128 to 59231132 4 + TSS region transcription start site region 66962
Tssr72680 7 59242576 to 59242602 26 - TSS region transcription start site region 72680
Tssr72681 7 59244267 to 59244273 6 - TSS region transcription start site region 72681
Tssr66963 7 59248728 to 59248732 4 + TSS region transcription start site region 66963
Tssr72682 7 59258737 to 59258747 10 - TSS region transcription start site region 72682
Gm44562 7 59258855 to 59260201 1346 - unclassified gene predicted gene 44562
Gm44559 7 59262923 to 59263934 1011 - unclassified gene predicted gene 44559
Tssr66964 7 59276914 to 59276924 10 + TSS region transcription start site region 66964
Tssr72683 7 59280051 to 59280057 6 - TSS region transcription start site region 72683
Tssr72684 7 59281186 to 59281189 3 - TSS region transcription start site region 72684
Tssr72685 7 59284933 to 59284936 3 - TSS region transcription start site region 72685
Gm44560 7 59286052 to 59289166 3114 - unclassified gene predicted gene 44560
Tssr72686 7 59288672 to 59288691 19 - TSS region transcription start site region 72686
Gm44830 7 59292518 to 59293101 583 + unclassified gene predicted gene 44830
Tssr66965 7 59306555 to 59306561 6 + TSS region transcription start site region 66965
Tssr66966 7 59314327 to 59314341 14 + TSS region transcription start site region 66966
Tssr66967 7 59314600 to 59314628 28 + TSS region transcription start site region 66967
Tssr72687 7 59315383 to 59315388 5 - TSS region transcription start site region 72687
Gm44829 7 59318631 to 59321823 3192 + unclassified gene predicted gene 44829
Tssr2279 7 59324145 to 59324153 8 - TSS region transcription start site region 2279
A230103L15Rik 7 59327318 to 59331189 3871 - unclassified non-coding RNA gene RIKEN cDNA A230103L15 gene
Gm25499 7 59342226 to 59342294 68 - snoRNA gene predicted gene, 25499
Gm24966 7 59344073 to 59344151 78 - snoRNA gene predicted gene, 24966
Gm22496 7 59347337 to 59347424 87 - snoRNA gene predicted gene, 22496
Gm25648 7 59347681 to 59347759 78 - snoRNA gene predicted gene, 25648
Gm24306 7 59349536 to 59349614 78 - snoRNA gene predicted gene, 24306
Gm25934 7 59351409 to 59351487 78 - snoRNA gene predicted gene, 25934
Gm25156 7 59353283 to 59353361 78 - snoRNA gene predicted gene, 25156
Gm26488 7 59355152 to 59355230 78 - snoRNA gene predicted gene, 26488
Gm24220 7 59357021 to 59357099 78 - snoRNA gene predicted gene, 24220
Gm24653 7 59358890 to 59358968 78 - snoRNA gene predicted gene, 24653
Gm24969 7 59360760 to 59360838 78 - snoRNA gene predicted gene, 24969
Gm24417 7 59362628 to 59362706 78 - snoRNA gene predicted gene, 24417
Gm25121 7 59364496 to 59364574 78 - snoRNA gene predicted gene, 25121
Gm24657 7 59366366 to 59366444 78 - snoRNA gene predicted gene, 24657
Gm26230 7 59368236 to 59368314 78 - snoRNA gene predicted gene, 26230
Gm23922 7 59370106 to 59370184 78 - snoRNA gene predicted gene, 23922
Gm25314 7 59371975 to 59372053 78 - snoRNA gene predicted gene, 25314
Gm26096 7 59373844 to 59373922 78 - snoRNA gene predicted gene, 26096
Gm22996 7 59375713 to 59375791 78 - snoRNA gene predicted gene, 22996
Gm26499 7 59377582 to 59377660 78 - snoRNA gene predicted gene, 26499
Gm25646 7 59379451 to 59379529 78 - snoRNA gene predicted gene, 25646
Gm26498 7 59386081 to 59386159 78 - snoRNA gene predicted gene, 26498
Gm23660 7 59387953 to 59388031 78 - snoRNA gene predicted gene, 23660
Gm23933 7 59389820 to 59389898 78 - snoRNA gene predicted gene, 23933
Gm24862 7 59391690 to 59391768 78 - snoRNA gene predicted gene, 24862
Gm24866 7 59393561 to 59393639 78 - snoRNA gene predicted gene, 24866
Gm22348 7 59405330 to 59405408 78 - snoRNA gene predicted gene, 22348
Gm26466 7 59407197 to 59407275 78 - snoRNA gene predicted gene, 26466
Gm24799 7 59409063 to 59409141 78 - snoRNA gene predicted gene, 24799
Gm24088 7 59410933 to 59411011 78 - snoRNA gene predicted gene, 24088
Gm25463 7 59412802 to 59412880 78 - snoRNA gene predicted gene, 25463
Gm25229 7 59414091 to 59414169 78 - snoRNA gene predicted gene, 25229
Gm24528 7 59415590 to 59415668 78 - snoRNA gene predicted gene, 24528
Gm23356 7 59417457 to 59417535 78 - snoRNA gene predicted gene, 23356
Gm25449 7 59419323 to 59419401 78 - snoRNA gene predicted gene, 25449
Gm24872 7 59421187 to 59421265 78 - snoRNA gene predicted gene, 24872
Gm26337 7 59423055 to 59423133 78 - snoRNA gene predicted gene, 26337
Gm23145 7 59424924 to 59425002 78 - snoRNA gene predicted gene, 23145
Gm22130 7 59426795 to 59426873 78 - snoRNA gene predicted gene, 22130
Gm25988 7 59428665 to 59428743 78 - snoRNA gene predicted gene, 25988
Gm25221 7 59430536 to 59430614 78 - snoRNA gene predicted gene, 25221
Gm26389 7 59432407 to 59432485 78 - snoRNA gene predicted gene, 26389
Gm23471 7 59434277 to 59434355 78 - snoRNA gene predicted gene, 23471
Gm25120 7 59436149 to 59436227 78 - snoRNA gene predicted gene, 25120
Gm24418 7 59438019 to 59438097 78 - snoRNA gene predicted gene, 24418
Gm23687 7 59439891 to 59439969 78 - snoRNA gene predicted gene, 23687
Gm22393 7 59441762 to 59441840 78 - snoRNA gene predicted gene, 22393
Gm24639 7 59443631 to 59443709 78 - snoRNA gene predicted gene, 24639
Gm24566 7 59445503 to 59445581 78 - snoRNA gene predicted gene, 24566
Gm22111 7 59447374 to 59447452 78 - snoRNA gene predicted gene, 22111
Gm23076 7 59449243 to 59449321 78 - snoRNA gene predicted gene, 23076
Gm25874 7 59451115 to 59451193 78 - snoRNA gene predicted gene, 25874
Gm25088 7 59452983 to 59453061 78 - snoRNA gene predicted gene, 25088
Gm22510 7 59454855 to 59454933 78 - snoRNA gene predicted gene, 22510
Gm24983 7 59458815 to 59458883 68 - snoRNA gene predicted gene, 24983
Gm24027 7 59460677 to 59460755 78 - snoRNA gene predicted gene, 24027
Gm22524 7 59462548 to 59462626 78 - snoRNA gene predicted gene, 22524
Gm22630 7 59464420 to 59464498 78 - snoRNA gene predicted gene, 22630
Gm25741 7 59466292 to 59466370 78 - snoRNA gene predicted gene, 25741
Gm26059 7 59468163 to 59468241 78 - snoRNA gene predicted gene, 26059
Gm25175 7 59470034 to 59470112 78 - snoRNA gene predicted gene, 25175
Gm22511 7 59471904 to 59471982 78 - snoRNA gene predicted gene, 22511
Gm25077 7 59473776 to 59473854 78 - snoRNA gene predicted gene, 25077
Gm22834 7 59475622 to 59475700 78 - snoRNA gene predicted gene, 22834
Gm24926 7 59477493 to 59477571 78 - snoRNA gene predicted gene, 24926
Gm26200 7 59479347 to 59479425 78 - snoRNA gene predicted gene, 26200
Gm22632 7 59481219 to 59481297 78 - snoRNA gene predicted gene, 22632
Gm23254 7 59483074 to 59483152 78 - snoRNA gene predicted gene, 23254
Gm26390 7 59484948 to 59485026 78 - snoRNA gene predicted gene, 26390
Gm26366 7 59486818 to 59486896 78 - snoRNA gene predicted gene, 26366
Gm26336 7 59488689 to 59488767 78 - snoRNA gene predicted gene, 26336
Gm26283 7 59490561 to 59490639 78 - snoRNA gene predicted gene, 26283
Gm25098 7 59492432 to 59492510 78 - snoRNA gene predicted gene, 25098
Gm24702 7 59494300 to 59494378 78 - snoRNA gene predicted gene, 24702
Gm26432 7 59496169 to 59496247 78 - snoRNA gene predicted gene, 26432
Gm25462 7 59498041 to 59498119 78 - snoRNA gene predicted gene, 25462
Gm24495 7 59507198 to 59507276 78 - snoRNA gene predicted gene, 24495
Gm25523 7 59509068 to 59509146 78 - snoRNA gene predicted gene, 25523
Gm22255 7 59510934 to 59511012 78 - snoRNA gene predicted gene, 22255
Gm23449 7 59512795 to 59512873 78 - snoRNA gene predicted gene, 23449
Gm23310 7 59514667 to 59514745 78 - snoRNA gene predicted gene, 23310
Gm25461 7 59516539 to 59516617 78 - snoRNA gene predicted gene, 25461
Gm24310 7 59518411 to 59518489 78 - snoRNA gene predicted gene, 24310
Gm22909 7 59520284 to 59520362 78 - snoRNA gene predicted gene, 22909
Gm25823 7 59522156 to 59522233 77 - snoRNA gene predicted gene, 25823
Gm25647 7 59524028 to 59524105 77 - snoRNA gene predicted gene, 25647
Gm22252 7 59525899 to 59525977 78 - snoRNA gene predicted gene, 22252
Gm26392 7 59527771 to 59527849 78 - snoRNA gene predicted gene, 26392
Gm24219 7 59529643 to 59529721 78 - snoRNA gene predicted gene, 24219
Gm25230 7 59531515 to 59531593 78 - snoRNA gene predicted gene, 25230
Gm22627 7 59533386 to 59533464 78 - snoRNA gene predicted gene, 22627
Gm24585 7 59535256 to 59535334 78 - snoRNA gene predicted gene, 24585
Gm23305 7 59537128 to 59537206 78 - snoRNA gene predicted gene, 23305
Gm24206 7 59538998 to 59539076 78 - snoRNA gene predicted gene, 24206
Gm25085 7 59540870 to 59540948 78 - snoRNA gene predicted gene, 25085
Gm25209 7 59542742 to 59542820 78 - snoRNA gene predicted gene, 25209
Gm23682 7 59544615 to 59544693 78 - snoRNA gene predicted gene, 23682
Gm24654 7 59546487 to 59546565 78 - snoRNA gene predicted gene, 24654
Gm26334 7 59548359 to 59548437 78 - snoRNA gene predicted gene, 26334
Gm25742 7 59550238 to 59550316 78 - snoRNA gene predicted gene, 25742
Gm25585 7 59552109 to 59552187 78 - snoRNA gene predicted gene, 25585
Gm25840 7 59553981 to 59554059 78 - snoRNA gene predicted gene, 25840
Gm25089 7 59555854 to 59555932 78 - snoRNA gene predicted gene, 25089
Gm24040 7 59557727 to 59557805 78 - snoRNA gene predicted gene, 24040
Gm22050 7 59559599 to 59559677 78 - snoRNA gene predicted gene, 22050
Gm23286 7 59561472 to 59561550 78 - snoRNA gene predicted gene, 23286
Gm24021 7 59563345 to 59563423 78 - snoRNA gene predicted gene, 24021
Gm22274 7 59565218 to 59565296 78 - snoRNA gene predicted gene, 22274
Gm24652 7 59567091 to 59567169 78 - snoRNA gene predicted gene, 24652
Gm23618 7 59568964 to 59569042 78 - snoRNA gene predicted gene, 23618
Gm23688 7 59570835 to 59570913 78 - snoRNA gene predicted gene, 23688
Gm24570 7 59572707 to 59572785 78 - snoRNA gene predicted gene, 24570
Gm26467 7 59574579 to 59574656 77 - snoRNA gene predicted gene, 26467
Gm25194 7 59576449 to 59576527 78 - snoRNA gene predicted gene, 25194
Gm22640 7 59578319 to 59578397 78 - snoRNA gene predicted gene, 22640
Gm24952 7 59580191 to 59580269 78 - snoRNA gene predicted gene, 24952
Gm25087 7 59582063 to 59582140 77 - snoRNA gene predicted gene, 25087
Gm23944 7 59583934 to 59584012 78 - snoRNA gene predicted gene, 23944
Gm22629 7 59585806 to 59585884 78 - snoRNA gene predicted gene, 22629
Gm26374 7 59587676 to 59587754 78 - snoRNA gene predicted gene, 26374
Gm26284 7 59589548 to 59589626 78 - snoRNA gene predicted gene, 26284
Gm25452 7 59591422 to 59591500 78 - snoRNA gene predicted gene, 25452
Gm25984 7 59593294 to 59593372 78 - snoRNA gene predicted gene, 25984
Gm25146 7 59595165 to 59595243 78 - snoRNA gene predicted gene, 25146
Gm24759 7 59597035 to 59597113 78 - snoRNA gene predicted gene, 24759
Gm24100 7 59598904 to 59598982 78 - snoRNA gene predicted gene, 24100
Gm22253 7 59600776 to 59600854 78 - snoRNA gene predicted gene, 22253
Gm25017 7 59602647 to 59602725 78 - snoRNA gene predicted gene, 25017
Gm23575 7 59604519 to 59604597 78 - snoRNA gene predicted gene, 23575
Gm22391 7 59606390 to 59606468 78 - snoRNA gene predicted gene, 22391
Gm22449 7 59608262 to 59608340 78 - snoRNA gene predicted gene, 22449
Gm24137 7 59610133 to 59610211 78 - snoRNA gene predicted gene, 24137
Gm22912 7 59612005 to 59612083 78 - snoRNA gene predicted gene, 22912
Gm25710 7 59613876 to 59613954 78 - snoRNA gene predicted gene, 25710
Gm26434 7 59615744 to 59615822 78 - snoRNA gene predicted gene, 26434
Gm23560 7 59617612 to 59617690 78 - snoRNA gene predicted gene, 23560
Gm25870 7 59619017 to 59619095 78 - snoRNA gene predicted gene, 25870
Ipw 7 59619158 to 59678878 59720 - lncRNA gene imprinted gene in the Prader-Willi syndrome region
Gm44831 7 59627688 to 59630676 2988 - unclassified gene predicted gene 44831