Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:57848162-59188530

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Splq7 7 33798302 to 58499217 24700915 QTL spleen weight QTL 7
Epfq5 7 33798302 to 58499217 24700915 QTL epididymal fat pad weight QTL 5
W10q18 7 33798302 to 58499217 24700915 QTL weight 10 weeks QTL 18
W3q10 7 33798302 to 58499217 24700915 QTL weight 3 weeks QTL 10
Tailq5 7 33798302 to 58499217 24700915 QTL tail length QTL 5
Kidq5 7 33798302 to 58499217 24700915 QTL kidney weight QTL 5
W6q17 7 33798302 to 58499217 24700915 QTL weight 6 weeks QTL 17
Lvrq6 7 33798302 to 58499217 24700915 QTL liver weight QTL 6
Gm5596 7 57878806 to 57881226 2420 - pseudogene predicted gene 5596
Gm34272 7 57894840 to 57895092 252 + pseudogene predicted gene, 34272
Gm18127 7 57899949 to 57900647 698 - pseudogene predicted gene, 18127
Gm23911 7 58005205 to 58005338 133 + snoRNA gene predicted gene, 23911
Gm26288 7 58148096 to 58148227 131 - snoRNA gene predicted gene, 26288
D7Mit160 7 58227632 to 58227760 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 160
D7Mit121 7 58263662 to 58263805 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 121
Tssr2278 7 58308226 to 58308230 4 - TSS region transcription start site region 2278
Cpgi19172 7 58399074 to 58399317 243 CpG island CpG island 19172
n-TEttc7 7 58399315 to 58399386 71 + tRNA gene nuclear encoded tRNA glutamic acid 7 (anticodon TTC)
Tssr66945 7 58458531 to 58458536 5 + TSS region transcription start site region 66945
D7Dcr26 7 58499072 to 58499192 120 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 26
D7Mit91 7 58499072 to 58499217 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 91
Chlq18 7 58499072 to 58499217 145 QTL circulating hormone level QTL 18
Fdr1 7 58499072 to 58499217 145 QTL fat response to dietary restriction 1
Gm44852 7 58518162 to 58518530 368 + pseudogene predicted gene 44852
D7Mit198 7 58542577 to 58542724 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 198
Gm45157 7 58554920 to 58555320 400 + pseudogene predicted gene 45157
Atp10a 7 58656166 to 58829420 173254 + protein coding gene ATPase, class V, type 10A
Cpgi19173 7 58658014 to 58658989 975 CpG island CpG island 19173
Tssr66946 7 58658181 to 58658294 113 + TSS region transcription start site region 66946
Tssr66947 7 58658355 to 58658376 21 + TSS region transcription start site region 66947
Tssr66948 7 58658381 to 58658411 30 + TSS region transcription start site region 66948
Tssr66949 7 58658420 to 58658431 11 + TSS region transcription start site region 66949
Gm44936 7 58675421 to 58676155 734 + unclassified gene predicted gene 44936
Tssr66950 7 58697321 to 58697332 11 + TSS region transcription start site region 66950
Gm39019 7 58706733 to 58740339 33606 - lncRNA gene predicted gene, 39019
Tssr66951 7 58709861 to 58709863 2 + TSS region transcription start site region 66951
Tssr66952 7 58710516 to 58710517 1 + TSS region transcription start site region 66952
Gm44937 7 58720199 to 58722889 2690 + unclassified gene predicted gene 44937
D7Mit346 7 58735100 to 58735194 94 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 346
Tssr72674 7 58740429 to 58740440 11 - TSS region transcription start site region 72674
Tssr72675 7 58740520 to 58740528 8 - TSS region transcription start site region 72675
Tssr72676 7 58740535 to 58740547 12 - TSS region transcription start site region 72676
Tssr66953 7 58751025 to 58751030 5 + TSS region transcription start site region 66953
Tssr66954 7 58755379 to 58755391 12 + TSS region transcription start site region 66954
Tssr72677 7 58759446 to 58759461 15 - TSS region transcription start site region 72677
Gm6226 7 58836796 to 58837938 1142 - pseudogene predicted gene 6226
Cpgi19174 7 58836843 to 58837154 311 CpG island CpG island 19174
Gm39020 7 58842545 to 59081916 239371 + lncRNA gene predicted gene, 39020
Gm44938 7 58926564 to 58927790 1226 + pseudogene predicted gene 44938
Gm18453 7 58948934 to 58949559 625 - pseudogene predicted gene, 18453
Gm9373 7 58951578 to 58952176 598 + pseudogene predicted gene 9373
Gm9375 7 58970237 to 58971139 902 + pseudogene predicted gene 9375
Gm45189 7 59109139 to 59109501 362 + pseudogene predicted gene 45189
Gm9377 7 59109920 to 59110542 622 + pseudogene predicted gene 9377
Gm44743 7 59171529 to 59171914 385 + pseudogene predicted gene 44743
D7Mit296 7 59176325 to 59176449 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 296