Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:57578096-58718227

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfq5 7 33798302 to 58499217 24700915 QTL epididymal fat pad weight QTL 5
Lvrq6 7 33798302 to 58499217 24700915 QTL liver weight QTL 6
W6q17 7 33798302 to 58499217 24700915 QTL weight 6 weeks QTL 17
Kidq5 7 33798302 to 58499217 24700915 QTL kidney weight QTL 5
Splq7 7 33798302 to 58499217 24700915 QTL spleen weight QTL 7
Tailq5 7 33798302 to 58499217 24700915 QTL tail length QTL 5
W3q10 7 33798302 to 58499217 24700915 QTL weight 3 weeks QTL 10
W10q18 7 33798302 to 58499217 24700915 QTL weight 10 weeks QTL 18
Gm42385 7 57519645 to 57590410 70765 - lncRNA gene predicted gene, 42385
Mir6389 7 57581061 to 57581162 101 + miRNA gene microRNA 6389
Cpgi19171 7 57590476 to 57592373 1897 CpG island CpG island 19171
Tssr66937 7 57590503 to 57590523 20 + TSS region transcription start site region 66937
Gabrb3 7 57590518 to 57828802 238284 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
Del(7Gabrb3-Ube3a)1Yhj 7 57590518 to 59306733 1716215 chromosomal deletion deletion, Chr 7, Yong-hui Jiang 1
Tssr66938 7 57590526 to 57590553 27 + TSS region transcription start site region 66938
Tssr66939 7 57590565 to 57590572 7 + TSS region transcription start site region 66939
Tssr66940 7 57591147 to 57591191 44 + TSS region transcription start site region 66940
Tssr66941 7 57591193 to 57591203 10 + TSS region transcription start site region 66941
Gm44853 7 57718912 to 57719161 249 - pseudogene predicted gene 44853
Tssr66942 7 57734359 to 57734364 5 + TSS region transcription start site region 66942
Tssr72673 7 57768683 to 57768715 32 - TSS region transcription start site region 72673
Gm44708 7 57775429 to 57777665 2236 + unclassified gene predicted gene 44708
Tssr66943 7 57792534 to 57792538 4 + TSS region transcription start site region 66943
Tssr66944 7 57825676 to 57825691 15 + TSS region transcription start site region 66944
Gm5596 7 57878806 to 57881226 2420 - pseudogene predicted gene 5596
Gm34272 7 57894840 to 57895092 252 + pseudogene predicted gene, 34272
Gm18127 7 57899949 to 57900647 698 - pseudogene predicted gene, 18127
Gm23911 7 58005205 to 58005338 133 + snoRNA gene predicted gene, 23911
Gm26288 7 58148096 to 58148227 131 - snoRNA gene predicted gene, 26288
D7Mit160 7 58227632 to 58227760 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 160
D7Mit121 7 58263662 to 58263805 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 121
Tssr2278 7 58308226 to 58308230 4 - TSS region transcription start site region 2278
Cpgi19172 7 58399074 to 58399317 243 CpG island CpG island 19172
n-TEttc7 7 58399315 to 58399386 71 + tRNA gene nuclear encoded tRNA glutamic acid 7 (anticodon TTC)
Tssr66945 7 58458531 to 58458536 5 + TSS region transcription start site region 66945
D7Mit91 7 58499072 to 58499217 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 91
D7Dcr26 7 58499072 to 58499192 120 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 26
Fdr1 7 58499072 to 58499217 145 QTL fat response to dietary restriction 1
Chlq18 7 58499072 to 58499217 145 QTL circulating hormone level QTL 18
Gm44852 7 58518162 to 58518530 368 + pseudogene predicted gene 44852
D7Mit198 7 58542577 to 58542724 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 198
Gm45157 7 58554920 to 58555320 400 + pseudogene predicted gene 45157
Atp10a 7 58656166 to 58829420 173254 + protein coding gene ATPase, class V, type 10A
Cpgi19173 7 58658014 to 58658989 975 CpG island CpG island 19173
Tssr66946 7 58658181 to 58658294 113 + TSS region transcription start site region 66946
Tssr66947 7 58658355 to 58658376 21 + TSS region transcription start site region 66947
Tssr66948 7 58658381 to 58658411 30 + TSS region transcription start site region 66948
Tssr66949 7 58658420 to 58658431 11 + TSS region transcription start site region 66949
Gm44936 7 58675421 to 58676155 734 + unclassified gene predicted gene 44936
Tssr66950 7 58697321 to 58697332 11 + TSS region transcription start site region 66950
Gm39019 7 58706733 to 58740339 33606 - lncRNA gene predicted gene, 39019
Tssr66951 7 58709861 to 58709863 2 + TSS region transcription start site region 66951
Tssr66952 7 58710516 to 58710517 1 + TSS region transcription start site region 66952