Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:57489949-58310647

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabra5 7 57407672 to 57510059 102387 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
Cpgi19170 7 57508795 to 57510269 1474 CpG island CpG island 19170
Tssr72666 7 57509379 to 57509395 16 - TSS region transcription start site region 72666
Tssr72667 7 57509397 to 57509410 13 - TSS region transcription start site region 72667
Tssr72668 7 57509411 to 57509425 14 - TSS region transcription start site region 72668
Tssr72669 7 57509439 to 57509453 14 - TSS region transcription start site region 72669
Tssr72670 7 57509916 to 57509976 60 - TSS region transcription start site region 72670
Tssr72671 7 57509984 to 57509993 9 - TSS region transcription start site region 72671
Tssr72672 7 57509995 to 57510056 61 - TSS region transcription start site region 72672
Gm42385 7 57519645 to 57590410 70765 - lncRNA gene predicted gene, 42385
Hfhl1 7 57574300 to 80632588 23058288 QTL high-frequency hearing loss 1
Mir6389 7 57581061 to 57581162 101 + miRNA gene microRNA 6389
Cpgi19171 7 57590476 to 57592373 1897 CpG island CpG island 19171
Tssr66937 7 57590503 to 57590523 20 + TSS region transcription start site region 66937
Del(7Gabrb3-Ube3a)1Yhj 7 57590518 to 59306733 1716215 chromosomal deletion deletion, Chr 7, Yong-hui Jiang 1
Gabrb3 7 57590518 to 57828802 238284 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
Tssr66938 7 57590526 to 57590553 27 + TSS region transcription start site region 66938
Tssr66939 7 57590565 to 57590572 7 + TSS region transcription start site region 66939
Tssr66940 7 57591147 to 57591191 44 + TSS region transcription start site region 66940
Tssr66941 7 57591193 to 57591203 10 + TSS region transcription start site region 66941
Gm44853 7 57718912 to 57719161 249 - pseudogene predicted gene 44853
Tssr66942 7 57734359 to 57734364 5 + TSS region transcription start site region 66942
Tssr72673 7 57768683 to 57768715 32 - TSS region transcription start site region 72673
Gm44708 7 57775429 to 57777665 2236 + unclassified gene predicted gene 44708
Tssr66943 7 57792534 to 57792538 4 + TSS region transcription start site region 66943
Tssr66944 7 57825676 to 57825691 15 + TSS region transcription start site region 66944
Gm5596 7 57878806 to 57881226 2420 - pseudogene predicted gene 5596
Gm34272 7 57894840 to 57895092 252 + pseudogene predicted gene, 34272
Gm18127 7 57899949 to 57900647 698 - pseudogene predicted gene, 18127
Gm23911 7 58005205 to 58005338 133 + snoRNA gene predicted gene, 23911
Gm26288 7 58148096 to 58148227 131 - snoRNA gene predicted gene, 26288
D7Mit160 7 58227632 to 58227760 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 160
D7Mit121 7 58263662 to 58263805 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 121
Tssr2278 7 58308226 to 58308230 4 - TSS region transcription start site region 2278