Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:57251547-57522498

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabrg3 7 56716465 to 57387188 670723 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
Gm39017 7 57276321 to 57281650 5329 - lncRNA gene predicted gene, 39017
Tssr72661 7 57312766 to 57312793 27 - TSS region transcription start site region 72661
Tssr72662 7 57313092 to 57313096 4 - TSS region transcription start site region 72662
Cpgi19169 7 57386547 to 57387498 951 CpG island CpG island 19169
Tssr72663 7 57386972 to 57386991 19 - TSS region transcription start site region 72663
Tssr72664 7 57387159 to 57387170 11 - TSS region transcription start site region 72664
Tssr72665 7 57387172 to 57387222 50 - TSS region transcription start site region 72665
Gm9962 7 57387272 to 57409941 22669 + antisense lncRNA gene predicted gene 9962
Gabra5 7 57407672 to 57510059 102387 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
Tssr66934 7 57419645 to 57419658 13 + TSS region transcription start site region 66934
Tssr66935 7 57419671 to 57419674 3 + TSS region transcription start site region 66935
Tssr66936 7 57468584 to 57468587 3 + TSS region transcription start site region 66936
Cpgi19170 7 57508795 to 57510269 1474 CpG island CpG island 19170
Tssr72666 7 57509379 to 57509395 16 - TSS region transcription start site region 72666
Tssr72667 7 57509397 to 57509410 13 - TSS region transcription start site region 72667
Tssr72668 7 57509411 to 57509425 14 - TSS region transcription start site region 72668
Tssr72669 7 57509439 to 57509453 14 - TSS region transcription start site region 72669
Tssr72670 7 57509916 to 57509976 60 - TSS region transcription start site region 72670
Tssr72671 7 57509984 to 57509993 9 - TSS region transcription start site region 72671
Tssr72672 7 57509995 to 57510056 61 - TSS region transcription start site region 72672
Gm42385 7 57519645 to 57590410 70765 - lncRNA gene predicted gene, 42385