MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:55906915-56017709

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cyfip1	7	55841962 to 55932633	90671	+	protein coding gene	cytoplasmic FMR1 interacting protein 1
Tssr66926	7	55926438 to 55926442	4	+	TSS region	transcription start site region 66926
Gm44616	7	55927177 to 55928908	1731	-	unclassified gene	predicted gene 44616
Tssr66927	7	55930158 to 55930174	16	+	TSS region	transcription start site region 66927
Nipa2	7	55931287 to 55962476	31189	-	protein coding gene	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
Cpgi19164	7	55961915 to 55962709	794		CpG island	CpG island 19164
Tssr72654	7	55962424 to 55962461	37	-	TSS region	transcription start site region 72654
Tssr72655	7	55962466 to 55962481	15	-	TSS region	transcription start site region 72655
Tssr66928	7	55962520 to 55962552	32	+	TSS region	transcription start site region 66928
A230056P14Rik	7	55962531 to 55980096	17565	+	lncRNA gene	RIKEN cDNA A230056P14 gene
Cpgi19165	7	55968253 to 55968479	226		CpG island	CpG island 19165
Gm44509	7	55973519 to 55974842	1323	-	unclassified gene	predicted gene 44509
Nipa1	7	55978484 to 56019573	41089	-	protein coding gene	non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
Gm15888	7	55979927 to 55980850	923	+	unclassified non-coding RNA gene	predicted gene 15888
Gm39016	7	55988073 to 55993284	5211	+	lncRNA gene	predicted gene, 39016
Gm44508	7	55994014 to 55995170	1156	-	unclassified gene	predicted gene 44508
Gm44510	7	56012948 to 56017479	4531	-	unclassified gene	predicted gene 44510
Rps12l1	7	56014016 to 56014414	398	+	pseudogene	ribosomal protein S12-like 1