Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:51935798-55355791

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
fit2 7 44207435 to 51995005 7787570 heritable phenotypic marker fitness 2
l7R4 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 4
l7R5 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 5
psrt 7 44207435 to 51995005 7787570 heritable phenotypic marker profound seizures and runting
Gas2 7 51862263 to 51995005 132742 + protein coding gene growth arrest specific 2
Svip 7 51997171 to 52006018 8847 - protein coding gene small VCP/p97-interacting protein
Cpgi19160 7 52005523 to 52006120 597 CpG island CpG island 19160
Tssr72648 7 52005678 to 52005719 41 - TSS region transcription start site region 72648
Tssr2276 7 52005778 to 52005791 13 - TSS region transcription start site region 2276
Tssr72649 7 52005792 to 52005872 80 - TSS region transcription start site region 72649
Tssr66900 7 52010705 to 52010707 2 + TSS region transcription start site region 66900
1700015G11Rik 7 52011680 to 52015716 4036 - protein coding gene RIKEN cDNA 1700015G11 gene
Tssr72650 7 52015710 to 52015723 13 - TSS region transcription start site region 72650
Tssr66901 7 52015808 to 52015850 42 + TSS region transcription start site region 66901
Gm9357 7 52022237 to 52029158 6921 - pseudogene predicted gene 9357
Gm22211 7 52075424 to 52075579 155 - snRNA gene predicted gene, 22211
Gm44683 7 52219960 to 52220443 483 + pseudogene predicted gene 44683
Gm20074 7 52411453 to 52411936 483 + pseudogene predicted gene, 20074
D7Mit197 7 52511105 to 52511294 189 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 197
D7Mit232 7 52613422 to 52613550 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 232
Tssr66902 7 52678909 to 52678910 1 + TSS region transcription start site region 66902
Tssr66903 7 52755401 to 52755415 14 + TSS region transcription start site region 66903
Gm6181 7 52755465 to 52755728 263 + pseudogene predicted pseudogene 6181
Tssr66904 7 52887589 to 52887612 23 + TSS region transcription start site region 66904
Gm33898 7 52887595 to 52976998 89403 + lncRNA gene predicted gene, 33898
Tssr72651 7 52918723 to 52918730 7 - TSS region transcription start site region 72651
Gm22444 7 52927070 to 52927177 107 + snRNA gene predicted gene, 22444
Gm18906 7 52990272 to 52991002 730 - pseudogene predicted gene, 18906
Tssr72652 7 52995206 to 52995208 2 - TSS region transcription start site region 72652
Gm33990 7 53630798 to 53660791 29993 - lncRNA gene predicted gene, 33990
D7Dcr24 7 53721881 to 53721978 97 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 24
Gm9362 7 53803273 to 53804138 865 - pseudogene predicted gene 9362
Mir6238 7 53891761 to 53891889 128 - miRNA gene microRNA 6238
Gm44682 7 53995942 to 53998555 2613 + unclassified gene predicted gene 44682
Gm27921 7 54008473 to 54008580 107 - miRNA gene predicted gene, 27921
D7Mit120 7 54043337 to 54043604 267 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 120
Gm25956 7 54213169 to 54213385 216 - miRNA gene predicted gene, 25956
D7Mit196 7 54302883 to 54303002 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 196
Gm5776 7 54412158 to 54412478 320 - pseudogene predicted gene 5776
Tssr72653 7 54412521 to 54412530 9 - TSS region transcription start site region 72653
Gm6290 7 54604244 to 54611198 6954 - pseudogene predicted gene 6290
Tssr66905 7 54661002 to 54661016 14 + TSS region transcription start site region 66905
Cpgi19161 7 54835498 to 54836068 570 CpG island CpG island 19161
Luzp2 7 54835498 to 55268885 433387 + protein coding gene leucine zipper protein 2
Tssr66906 7 54835577 to 54835586 9 + TSS region transcription start site region 66906
Tssr66907 7 54835589 to 54835610 21 + TSS region transcription start site region 66907
Tssr66908 7 54835614 to 54835623 9 + TSS region transcription start site region 66908
Tssr66909 7 54835627 to 54835667 40 + TSS region transcription start site region 66909
Tssr66910 7 54835692 to 54835703 11 + TSS region transcription start site region 66910
Tssr66911 7 54835777 to 54835786 9 + TSS region transcription start site region 66911
Tssr66912 7 54835792 to 54835801 9 + TSS region transcription start site region 66912
Gm44895 7 54876114 to 54877651 1537 + unclassified gene predicted gene 44895
Tssr66913 7 54877174 to 54877224 50 + TSS region transcription start site region 66913
Gm44897 7 54883119 to 54884459 1340 + unclassified gene predicted gene 44897
Gm44896 7 54931778 to 54932549 771 - unclassified gene predicted gene 44896
Gm44894 7 55025042 to 55027215 2173 + unclassified gene predicted gene 44894
4833421K07Rik 7 55088597 to 55089987 1390 + unclassified gene RIKEN cDNA 4833421K07 gene
Tssr66914 7 55132009 to 55132012 3 + TSS region transcription start site region 66914
Skts1 7 55241638 to 55241834 196 QTL skin tumor susceptibility 1
D7Mit87 7 55241638 to 55241834 196 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 87
Gm17838 7 55243248 to 55243942 694 - pseudogene predicted gene, 17838
Gm24116 7 55243933 to 55244039 106 - snRNA gene predicted gene, 24116
Gm39014 7 55273380 to 55276701 3321 + lncRNA gene predicted gene, 39014
Gm44898 7 55275936 to 55278158 2222 + unclassified gene predicted gene 44898
D7Dcr25 7 55308897 to 55308997 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 25
Lgth10 7 126000000 to 52000000 -74000000 QTL body length 10