Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:5167818-6219719

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn1r56 7 5194916 to 5196747 1831 - protein coding gene vomeronasal 1 receptor 56
Vmn1r57 7 5220478 to 5221410 932 + protein coding gene vomeronasal 1 receptor 57
Gm45146 7 5263084 to 5263304 220 + pseudogene predicted gene 45146
Gm23942 7 5277344 to 5277450 106 - snRNA gene predicted gene, 23942
Nlrp2 7 5298547 to 5351035 52488 - protein coding gene NLR family, pyrin domain containing 2
Gm18757 7 5304878 to 5308018 3140 + pseudogene predicted gene, 18757
Gm5065 7 5350542 to 5360682 10140 + protein coding gene predicted gene 5065
Gm45147 7 5353486 to 5353857 371 + pseudogene predicted gene 45147
Vmn1r58 7 5408887 to 5413145 4258 - protein coding gene vomeronasal 1 receptor 58
Gm44543 7 5414736 to 5415131 395 + pseudogene predicted gene 44543
Vmn1r-ps39 7 5427924 to 5428275 351 - pseudogene vomeronasal 1 receptor, pseudogene 39
Vmn1r59 7 5453827 to 5454759 932 - protein coding gene vomeronasal 1 receptor 59
D7Mit243 7 5455010 to 5455113 103 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 243
Gm7025 7 5460119 to 5463500 3381 - pseudogene predicted gene 7025
Vmn2r28 7 5480456 to 5493851 13395 - protein coding gene vomeronasal 2, receptor 28
Vmn1r60 7 5544197 to 5545099 902 - protein coding gene vomeronasal 1 receptor 60
Vmn1r-ps40 7 5572733 to 5573075 342 - pseudogene vomeronasal 1 receptor, pseudogene 40
Vmn1r61 7 5610411 to 5611313 902 - protein coding gene vomeronasal 1 receptor 61
Vmn1r-ps41 7 5654692 to 5655637 945 + pseudogene vomeronasal 1 receptor, pseudogene 41
Gm9591 7 5671569 to 5672001 432 - pseudogene predicted gene 9591
Vmn1r62 7 5674627 to 5676383 1756 + protein coding gene vomeronasal 1 receptor 62
Gm3440 7 5692818 to 5694719 1901 - pseudogene predicted gene 3440
Vmn1r-ps42 7 5728011 to 5728611 600 + pseudogene vomeronasal 1 receptor, pseudogene 42
Tssr2074 7 5742023 to 5742027 4 - TSS region transcription start site region 2074
Gm44821 7 5759108 to 5763417 4309 - pseudogene predicted gene 44821
Vmn1r-ps43 7 5768255 to 5769325 1070 - pseudogene vomeronasal 1 receptor, pseudogene 43
Vmn1r63 7 5802345 to 5805445 3100 - protein coding gene vomeronasal 1 receptor 63
Gm44820 7 5807013 to 5807408 395 + pseudogene predicted gene 44820
Vmn1r-ps44 7 5825644 to 5826177 533 - pseudogene vomeronasal 1 receptor, pseudogene 44
Vmn1r64 7 5883580 to 5884542 962 - protein coding gene vomeronasal 1 receptor 64
Gm20399 7 5905019 to 5905150 131 + pseudogene predicted gene 20399
Vmn1r-ps45 7 5929502 to 5930419 917 - pseudogene vomeronasal 1 receptor, pseudogene 45
Vmn1r-ps46 7 5966268 to 5967216 948 - pseudogene vomeronasal 1 receptor, pseudogene 46
Vmn1r65 7 6007750 to 6011010 3260 - protein coding gene vomeronasal 1 receptor 65
Tssr64431 7 6018978 to 6018979 1 + TSS region transcription start site region 64431
Gm5321 7 6019022 to 6019468 446 + pseudogene predicted gene 5321
Gm5052 7 6022661 to 6023168 507 - pseudogene predicted gene 5052
Gm38420 7 6038752 to 6039303 551 + pseudogene predicted gene, 38420
4933402C05Rik 7 6039107 to 6042555 3448 + lincRNA gene RIKEN cDNA 4933402C05 gene
Gm44733 7 6040816 to 6042950 2134 - lincRNA gene predicted gene 44733
Nlrp4c 7 6045161 to 6105149 59988 + protein coding gene NLR family, pyrin domain containing 4C
Tssr64432 7 6045168 to 6045197 29 + TSS region transcription start site region 64432
Gm18758 7 6116724 to 6124731 8007 + pseudogene predicted gene, 18758
Zfp787 7 6131491 to 6155997 24506 - protein coding gene zinc finger protein 787
Cpgi18282 7 6131980 to 6133147 1167 CpG island CpG island 18282
4933431C10Rik 7 6136430 to 6137695 1265 + unclassified gene RIKEN cDNA 4933431C10 gene
Cpgi18283 7 6154979 to 6156577 1598 CpG island CpG island 18283
Gm45841 7 6155287 to 6155450 163 - unclassified gene predicted gene 45841
Tssr64433 7 6155294 to 6155308 14 + TSS region transcription start site region 64433
Tssr64434 7 6155800 to 6155811 11 + TSS region transcription start site region 64434
Tssr70581 7 6155939 to 6155970 31 - TSS region transcription start site region 70581
Tssr70582 7 6156166 to 6156200 34 - TSS region transcription start site region 70582
Gm36371 7 6156516 to 6157618 1102 + bidirectional promoter lncRNA gene predicted gene, 36371
Tssr70583 7 6168591 to 6168602 11 - TSS region transcription start site region 70583
Cpgi18284 7 6171430 to 6173168 1738 CpG island CpG island 18284
Zfp444 7 6172464 to 6193104 20640 + protein coding gene zinc finger protein 444
Tssr64435 7 6172496 to 6172531 35 + TSS region transcription start site region 64435
Tssr64436 7 6172533 to 6172556 23 + TSS region transcription start site region 64436
Tssr70584 7 6173102 to 6173130 28 - TSS region transcription start site region 70584
Gm45148 7 6179975 to 6183561 3586 + sense intronic lncRNA gene predicted gene 45148
Cpgi18285 7 6183877 to 6184218 341 CpG island CpG island 18285
Cpgi18286 7 6189258 to 6190029 771 CpG island CpG island 18286
Tssr64437 7 6191224 to 6191228 4 + TSS region transcription start site region 64437
Galp 7 6197090 to 6216137 19047 + protein coding gene galanin-like peptide
Cpgi18287 7 6202470 to 6202807 337 CpG island CpG island 18287