Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:51658909-53698910

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
l7R4 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 4
l7R5 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 5
psrt 7 44207435 to 51995005 7787570 heritable phenotypic marker profound seizures and runting
fit2 7 44207435 to 51995005 7787570 heritable phenotypic marker fitness 2
Slc17a6 7 51622006 to 51671119 49113 + protein coding gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
D7Mit85 7 51667139 to 51667295 156 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 85
Heal20 7 51667139 to 51667295 156 QTL wound healing/regeneration 20
Gm42402 7 51697917 to 51698970 1053 + pseudogene predicted gene, 42402
Tssr66885 7 51724303 to 51724314 11 + TSS region transcription start site region 66885
Tssr66886 7 51725245 to 51725254 9 + TSS region transcription start site region 66886
Gm7336 7 51746679 to 51747902 1223 + pseudogene predicted gene 7336
Gm29296 7 51750796 to 51772726 21930 - lincRNA gene predicted gene 29296
Tssr72646 7 51772748 to 51772770 22 - TSS region transcription start site region 72646
Gm33290 7 51772979 to 51777779 4800 + lncRNA gene predicted gene, 33290
Tssr66887 7 51787442 to 51787444 2 + TSS region transcription start site region 66887
D7Mit83 7 51798121 to 51798270 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 83
Mdmsc3 7 51798121 to 51798270 149 QTL modifier of muscularity 3
Gm45001 7 51850304 to 51852818 2514 + unclassified gene predicted gene 45001
Gm45235 7 51855585 to 51860049 4464 + unclassified non-coding RNA gene predicted gene 45235
Fancf 7 51860577 to 51862267 1690 - protein coding gene Fanconi anemia, complementation group F
Cpgi19159 7 51861193 to 51862527 1334 CpG island CpG island 19159
Tssr2273 7 51861805 to 51861834 29 + TSS region transcription start site region 2273
Tssr66888 7 51862006 to 51862035 29 + TSS region transcription start site region 66888
Tssr72647 7 51862216 to 51862281 65 - TSS region transcription start site region 72647
Gas2 7 51862263 to 51995005 132742 + protein coding gene growth arrest specific 2
Tssr66889 7 51878972 to 51879000 28 + TSS region transcription start site region 66889
Tssr66890 7 51879006 to 51879024 18 + TSS region transcription start site region 66890
Tssr66891 7 51879041 to 51879064 23 + TSS region transcription start site region 66891
Tssr66892 7 51879067 to 51879090 23 + TSS region transcription start site region 66892
Tssr2274 7 51879190 to 51879201 11 + TSS region transcription start site region 2274
Tssr66893 7 51879212 to 51879223 11 + TSS region transcription start site region 66893
Tssr2275 7 51880268 to 51880277 9 + TSS region transcription start site region 2275
Tssr66894 7 51880288 to 51880295 7 + TSS region transcription start site region 66894
Tssr66895 7 51880300 to 51880307 7 + TSS region transcription start site region 66895
Tssr66896 7 51880312 to 51880356 44 + TSS region transcription start site region 66896
Tssr66897 7 51887897 to 51887941 44 + TSS region transcription start site region 66897
Tssr66898 7 51887946 to 51887960 14 + TSS region transcription start site region 66898
Tssr66899 7 51887980 to 51887995 15 + TSS region transcription start site region 66899
Svip 7 51997171 to 52006018 8847 - protein coding gene small VCP/p97-interacting protein
Cpgi19160 7 52005523 to 52006120 597 CpG island CpG island 19160
Tssr72648 7 52005678 to 52005719 41 - TSS region transcription start site region 72648
Tssr2276 7 52005778 to 52005791 13 - TSS region transcription start site region 2276
Tssr72649 7 52005792 to 52005872 80 - TSS region transcription start site region 72649
Tssr66900 7 52010705 to 52010707 2 + TSS region transcription start site region 66900
1700015G11Rik 7 52011680 to 52015716 4036 - protein coding gene RIKEN cDNA 1700015G11 gene
Tssr72650 7 52015710 to 52015723 13 - TSS region transcription start site region 72650
Tssr66901 7 52015808 to 52015850 42 + TSS region transcription start site region 66901
Gm9357 7 52022237 to 52029158 6921 - pseudogene predicted gene 9357
Gm22211 7 52075424 to 52075579 155 - snRNA gene predicted gene, 22211
Gm44683 7 52219960 to 52220443 483 + pseudogene predicted gene 44683
Gm20074 7 52411453 to 52411936 483 + pseudogene predicted gene, 20074
D7Mit197 7 52511105 to 52511294 189 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 197
D7Mit232 7 52613422 to 52613550 128 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 232
Tssr66902 7 52678909 to 52678910 1 + TSS region transcription start site region 66902
Tssr66903 7 52755401 to 52755415 14 + TSS region transcription start site region 66903
Gm6181 7 52755465 to 52755728 263 + pseudogene predicted pseudogene 6181
Tssr66904 7 52887589 to 52887612 23 + TSS region transcription start site region 66904
Gm33898 7 52887595 to 52976998 89403 + lncRNA gene predicted gene, 33898
Tssr72651 7 52918723 to 52918730 7 - TSS region transcription start site region 72651
Gm22444 7 52927070 to 52927177 107 + snRNA gene predicted gene, 22444
Gm18906 7 52990272 to 52991002 730 - pseudogene predicted gene, 18906
Tssr72652 7 52995206 to 52995208 2 - TSS region transcription start site region 72652
Gm33990 7 53630798 to 53660791 29993 - lncRNA gene predicted gene, 33990
Lgth10 7 126000000 to 52000000 -74000000 QTL body length 10