Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:5077632-5177715

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
U2af2 7 5062143 to 5079938 17795 + protein coding gene U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
Tssr64418 7 5079354 to 5079374 20 + TSS region transcription start site region 64418
Tssr64419 7 5079470 to 5079497 27 + TSS region transcription start site region 64419
Cpgi18280 7 5079936 to 5081014 1078 CpG island CpG island 18280
Tssr64420 7 5080214 to 5080298 84 + TSS region transcription start site region 64420
Epn1 7 5080235 to 5098178 17943 + protein coding gene epsin 1
Tssr64421 7 5080326 to 5080384 58 + TSS region transcription start site region 64421
Tssr64422 7 5081922 to 5081928 6 + TSS region transcription start site region 64422
Tssr64423 7 5083703 to 5083740 37 + TSS region transcription start site region 64423
Tssr64424 7 5083922 to 5083946 24 + TSS region transcription start site region 64424
Tssr64425 7 5089112 to 5089120 8 + TSS region transcription start site region 64425
Tssr64426 7 5093846 to 5093878 32 + TSS region transcription start site region 64426
Tssr64427 7 5095676 to 5095705 29 + TSS region transcription start site region 64427
Tssr64428 7 5095890 to 5095908 18 + TSS region transcription start site region 64428
Tssr64429 7 5097241 to 5097291 50 + TSS region transcription start site region 64429
Tssr64430 7 5097584 to 5097595 11 + TSS region transcription start site region 64430
Rfpl4 7 5109787 to 5116911 7124 - protein coding gene ret finger protein-like 4
Rasl2-9 7 5124942 to 5125950 1008 - protein coding gene RAS-like, family 2, locus 9
Cpgi18281 7 5125727 to 5126413 686 CpG island CpG island 18281
Tssr70577 7 5125937 to 5125958 21 - TSS region transcription start site region 70577
Tssr70578 7 5125970 to 5125978 8 - TSS region transcription start site region 70578
Tssr70579 7 5125993 to 5125999 6 - TSS region transcription start site region 70579
Gm47692 7 5127396 to 5129356 1960 - pseudogene predicted gene, 47692
Gm26217 7 5127632 to 5127715 83 - miRNA gene predicted gene, 26217
Tssr70580 7 5129415 to 5129422 7 - TSS region transcription start site region 70580
Vmn1r55 7 5146490 to 5147422 932 - protein coding gene vomeronasal 1 receptor 55