Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:5052054-5072104

Filter by:
30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18275 7 5051252 to 5052096 844 CpG island CpG island 18275
Zfp580 7 5051538 to 5053723 2185 + protein coding gene zinc finger protein 580
Cpgi18276 7 5052579 to 5053629 1050 CpG island CpG island 18276
Ccdc106 7 5053823 to 5060785 6962 + protein coding gene coiled-coil domain containing 106
Cpgi18277 7 5053966 to 5054158 192 CpG island CpG island 18277
Gm38941 7 5054472 to 5055000 528 + pseudogene predicted gene, 38941
Gm38940 7 5056373 to 5056837 464 - lncRNA gene predicted gene, 38940
Cpgi18278 7 5056669 to 5057326 657 CpG island CpG island 18278
Tssr64400 7 5056706 to 5056741 35 + TSS region transcription start site region 64400
Tssr64401 7 5056882 to 5056906 24 + TSS region transcription start site region 64401
Tssr64402 7 5057161 to 5057188 27 + TSS region transcription start site region 64402
Gm45133 7 5059277 to 5062049 2772 - unclassified gene predicted gene 45133
Tssr64403 7 5059651 to 5059676 25 + TSS region transcription start site region 64403
Cpgi18279 7 5060214 to 5062738 2524 CpG island CpG island 18279
Tssr64404 7 5061357 to 5061383 26 + TSS region transcription start site region 64404
Tssr64405 7 5061398 to 5061411 13 + TSS region transcription start site region 64405
Tssr64406 7 5061672 to 5061752 80 + TSS region transcription start site region 64406
Tssr64407 7 5061753 to 5061762 9 + TSS region transcription start site region 64407
Tssr70576 7 5062054 to 5062104 50 - TSS region transcription start site region 70576
U2af2 7 5062143 to 5079938 17795 + protein coding gene U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
Tssr64408 7 5062183 to 5062241 58 + TSS region transcription start site region 64408
Tssr64409 7 5062256 to 5062267 11 + TSS region transcription start site region 64409
Tssr64410 7 5065064 to 5065075 11 + TSS region transcription start site region 64410
Tssr64411 7 5065206 to 5065211 5 + TSS region transcription start site region 64411
Tssr64412 7 5068901 to 5069002 101 + TSS region transcription start site region 64412
Tssr64413 7 5069005 to 5069024 19 + TSS region transcription start site region 64413
Tssr64414 7 5069046 to 5069065 19 + TSS region transcription start site region 64414
Tssr64415 7 5069093 to 5069110 17 + TSS region transcription start site region 64415
Tssr64416 7 5069149 to 5069185 36 + TSS region transcription start site region 64416
Tssr64417 7 5069189 to 5069202 13 + TSS region transcription start site region 64417