Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:5000610-5040631

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Mit168 7 5003764 to 5003963 199 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 168
Fiz1 7 5007059 to 5014697 7638 - protein coding gene Flt3 interacting zinc finger protein 1
Tssr70570 7 5013244 to 5013264 20 - TSS region transcription start site region 70570
Tssr70571 7 5013281 to 5013302 21 - TSS region transcription start site region 70571
Tssr64382 7 5013372 to 5013388 16 + TSS region transcription start site region 64382
Cpgi18269 7 5014323 to 5014709 386 CpG island CpG island 18269
Tssr64383 7 5014438 to 5014454 16 + TSS region transcription start site region 64383
Tssr70572 7 5014645 to 5014684 39 - TSS region transcription start site region 70572
Cpgi18270 7 5015139 to 5016155 1016 CpG island CpG island 18270
Zfp524 7 5015252 to 5018493 3241 + protein coding gene zinc finger protein 524
Tssr64384 7 5015422 to 5015442 20 + TSS region transcription start site region 64384
Tssr64385 7 5015466 to 5015509 43 + TSS region transcription start site region 64385
Gm44973 7 5015496 to 5033097 17601 + protein coding gene predicted gene 44973
Tssr64386 7 5015521 to 5015536 15 + TSS region transcription start site region 64386
Cpgi18271 7 5020172 to 5020807 635 CpG island CpG island 18271
Zfp865 7 5020314 to 5033226 12912 + protein coding gene zinc finger protein 865
Tssr64387 7 5020415 to 5020426 11 + TSS region transcription start site region 64387
Tssr64388 7 5020441 to 5020452 11 + TSS region transcription start site region 64388
Tssr64389 7 5020453 to 5020463 10 + TSS region transcription start site region 64389
Tssr2073 7 5020472 to 5020481 9 + TSS region transcription start site region 2073
Tssr70573 7 5020502 to 5020516 14 - TSS region transcription start site region 70573
Tssr64390 7 5020561 to 5020602 41 + TSS region transcription start site region 64390
Tssr64391 7 5020610 to 5020631 21 + TSS region transcription start site region 64391
Cpgi18272 7 5029546 to 5032211 2665 CpG island CpG island 18272
4632433K11Rik 7 5034118 to 5035246 1128 + unclassified non-coding RNA gene RIKEN cDNA 4632433K11 gene
Zfp784 7 5034446 to 5038446 4000 - protein coding gene zinc finger protein 784
Cpgi18273 7 5035798 to 5036122 324 CpG island CpG island 18273
Cpgi18274 7 5038018 to 5038699 681 CpG island CpG island 18274
Tssr64392 7 5038308 to 5038323 15 + TSS region transcription start site region 64392
Tssr70574 7 5038413 to 5038426 13 - TSS region transcription start site region 70574
Tssr70575 7 5038427 to 5038450 23 - TSS region transcription start site region 70575
Gm45970 7 5038440 to 5048733 10293 + lncRNA gene predicted gene, 45970
Tssr64393 7 5039286 to 5039288 2 + TSS region transcription start site region 64393