Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:49915948-51235956

Filter by:
24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a5 7 49910146 to 49963856 53710 + protein coding gene solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Tssr66853 7 49959795 to 49959799 4 + TSS region transcription start site region 66853
Tssr66854 7 49959935 to 49959944 9 + TSS region transcription start site region 66854
Cpgi19154 7 49974727 to 49976026 1299 CpG island CpG island 19154
Tssr66855 7 49975010 to 49975102 92 + TSS region transcription start site region 66855
Tssr66856 7 49975228 to 49975340 112 + TSS region transcription start site region 66856
Nell1 7 49975350 to 50863289 887939 + protein coding gene NEL-like 1
Tssr2272 7 50313838 to 50313840 2 + TSS region transcription start site region 2272
Nell1os 7 50517309 to 50575884 58575 - antisense lncRNA gene NEL-like 1, opposite strand
Tssr72644 7 50575934 to 50575943 9 - TSS region transcription start site region 72644
Tssr72645 7 50575948 to 50575956 8 - TSS region transcription start site region 72645
Tssr66857 7 50599151 to 50599154 3 + TSS region transcription start site region 66857
Tssr66858 7 50599172 to 50599179 7 + TSS region transcription start site region 66858
Tssr66859 7 50599180 to 50599201 21 + TSS region transcription start site region 66859
4933405O20Rik 7 50599190 to 50600528 1338 + protein coding gene RIKEN cDNA 4933405O20 gene
Tssr66860 7 50599204 to 50599218 14 + TSS region transcription start site region 66860
Gm9343 7 50940546 to 50943154 2608 - pseudogene predicted gene 9343
Gm21032 7 50949294 to 50951871 2577 - pseudogene predicted gene, 21032
Gm21033 7 50958042 to 50960649 2607 - pseudogene predicted gene, 21033
Gm21034 7 50966796 to 50969403 2607 - pseudogene predicted gene, 21034
Gm21035 7 50975547 to 50978154 2607 - pseudogene predicted gene, 21035
Gm21036 7 50984298 to 50986908 2610 - pseudogene predicted gene, 21036
Gm21037 7 51152817 to 51155424 2607 - pseudogene predicted gene, 21037
Gm16478 7 51170517 to 51176537 6020 + pseudogene predicted pseudogene 16478