Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:48940350-49300538

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Mit365 7 48948564 to 48948641 77 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 365
D7Mit312 7 48948567 to 48948641 74 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 312
Cpgi19138 7 48958921 to 48959687 766 CpG island CpG island 19138
Tssr66771 7 48959051 to 48959085 34 + TSS region transcription start site region 66771
Nav2 7 48959069 to 49610088 651019 + protein coding gene neuron navigator 2
Tssr66772 7 48959089 to 48959128 39 + TSS region transcription start site region 66772
Tssr66773 7 48963897 to 48963916 19 + TSS region transcription start site region 66773
Tssr66774 7 48975807 to 48975828 21 + TSS region transcription start site region 66774
Tssr66775 7 48978281 to 48978294 13 + TSS region transcription start site region 66775
Tssr66776 7 48984349 to 48984352 3 + TSS region transcription start site region 66776
Tssr66777 7 48990839 to 48990847 8 + TSS region transcription start site region 66777
Tssr66778 7 49018513 to 49018519 6 + TSS region transcription start site region 66778
Gm45207 7 49062437 to 49062581 144 - pseudogene predicted gene 45207
D7Mit69 7 49065097 to 49065329 232 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 69
Ap7q 7 49065097 to 49065329 232 QTL alcohol preference 7 QTL
Gm32849 7 49085083 to 49086981 1898 + lincRNA gene predicted gene, 32849
Cpgi19139 7 49120350 to 49120538 188 CpG island CpG island 19139
Cpgi19140 7 49121012 to 49121199 187 CpG island CpG island 19140
9130015G15Rik 7 49122334 to 49159819 37485 - antisense lncRNA gene RIKEN cDNA 9130015G15 gene
Tssr72638 7 49134274 to 49134281 7 - TSS region transcription start site region 72638
Tssr66779 7 49160422 to 49160434 12 + TSS region transcription start site region 66779
Tssr66780 7 49160508 to 49160520 12 + TSS region transcription start site region 66780
Tssr66781 7 49160699 to 49160712 13 + TSS region transcription start site region 66781
Tssr66782 7 49160716 to 49160723 7 + TSS region transcription start site region 66782
Tssr66783 7 49160727 to 49160768 41 + TSS region transcription start site region 66783
Tssr66784 7 49160776 to 49160788 12 + TSS region transcription start site region 66784
Tssr72639 7 49162148 to 49162171 23 - TSS region transcription start site region 72639
Gm37613 7 49195541 to 49199120 3579 + unclassified gene predicted gene, 37613
Cpgi19141 7 49245576 to 49247385 1809 CpG island CpG island 19141
Tssr66785 7 49246131 to 49246202 71 + TSS region transcription start site region 66785
Tssr66786 7 49246208 to 49246215 7 + TSS region transcription start site region 66786
Tssr66787 7 49246812 to 49246817 5 + TSS region transcription start site region 66787
Cpgi19142 7 49250030 to 49250220 190 CpG island CpG island 19142
Tssr66788 7 49276070 to 49276077 7 + TSS region transcription start site region 66788
Tssr66789 7 49276692 to 49276707 15 + TSS region transcription start site region 66789
Tssr66790 7 49276720 to 49276740 20 + TSS region transcription start site region 66790
Tssr66791 7 49290571 to 49290613 42 + TSS region transcription start site region 66791