Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:48777977-48977980

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19136 7 48788762 to 48789547 785 CpG island CpG island 19136
Zdhhc13 7 48789003 to 48827437 38434 + protein coding gene zinc finger, DHHC domain containing 13
Tssr66764 7 48789017 to 48789060 43 + TSS region transcription start site region 66764
Tssr66765 7 48789062 to 48789081 19 + TSS region transcription start site region 66765
Gm45041 7 48796302 to 48799409 3107 + unclassified gene predicted gene 45041
Csrp3 7 48830398 to 48848033 17635 - protein coding gene cysteine and glycine-rich protein 3
Tssr72622 7 48843641 to 48843662 21 - TSS region transcription start site region 72622
Tssr72623 7 48843663 to 48843674 11 - TSS region transcription start site region 72623
Tssr72624 7 48845211 to 48845223 12 - TSS region transcription start site region 72624
Tssr72625 7 48845238 to 48845255 17 - TSS region transcription start site region 72625
Tssr72626 7 48848023 to 48848041 18 - TSS region transcription start site region 72626
E2f8 7 48866429 to 48881596 15167 - protein coding gene E2F transcription factor 8
Tssr72627 7 48866923 to 48866943 20 - TSS region transcription start site region 72627
Tssr66766 7 48877955 to 48877974 19 + TSS region transcription start site region 66766
Gm2788 7 48877958 to 48909109 31151 + lncRNA gene predicted gene 2788
Tssr66767 7 48877977 to 48877980 3 + TSS region transcription start site region 66767
Tssr72628 7 48878058 to 48878094 36 - TSS region transcription start site region 72628
Tssr72629 7 48878122 to 48878152 30 - TSS region transcription start site region 72629
Cpgi19137 7 48880483 to 48882473 1990 CpG island CpG island 19137
Tssr72630 7 48880979 to 48880990 11 - TSS region transcription start site region 72630
Tssr72631 7 48880992 to 48881030 38 - TSS region transcription start site region 72631
Tssr72632 7 48881032 to 48881050 18 - TSS region transcription start site region 72632
Tssr66768 7 48881332 to 48881365 33 + TSS region transcription start site region 66768
Tssr72633 7 48881604 to 48881619 15 - TSS region transcription start site region 72633
Tssr72634 7 48881641 to 48881671 30 - TSS region transcription start site region 72634
Tssr66769 7 48881864 to 48881866 2 + TSS region transcription start site region 66769
Tssr72635 7 48882351 to 48882354 3 - TSS region transcription start site region 72635
Tssr72636 7 48883335 to 48883343 8 - TSS region transcription start site region 72636
Tssr66770 7 48884809 to 48884816 7 + TSS region transcription start site region 66770
Tssr72637 7 48887066 to 48887090 24 - TSS region transcription start site region 72637
D7Mit272 7 48893011 to 48893129 118 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 272
D7Dcr20 7 48893016 to 48893137 121 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 20
Gm45282 7 48893685 to 48910062 16377 - lincRNA gene predicted gene 45282
Gm18559 7 48939515 to 48940118 603 - pseudogene predicted gene, 18559
D7Mit365 7 48948564 to 48948641 77 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 365
D7Mit312 7 48948567 to 48948641 74 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 312
Cpgi19138 7 48958921 to 48959687 766 CpG island CpG island 19138
Tssr66771 7 48959051 to 48959085 34 + TSS region transcription start site region 66771
Nav2 7 48959069 to 49610088 651019 + protein coding gene neuron navigator 2
Tssr66772 7 48959089 to 48959128 39 + TSS region transcription start site region 66772
Tssr66773 7 48963897 to 48963916 19 + TSS region transcription start site region 66773
Tssr66774 7 48975807 to 48975828 21 + TSS region transcription start site region 66774