Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:47616290-49296319

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139 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Mrgpra1-Mrgprb4)1And 7 47334875 to 48199178 864303 chromosomal deletion deletion, Chr 7, David J Anderson 1
Gm2707 7 47668095 to 47668808 713 - pseudogene predicted gene 2707
Tssr66754 7 47699936 to 47699950 14 + TSS region transcription start site region 66754
Tssr66755 7 47699964 to 47699968 4 + TSS region transcription start site region 66755
Tssr66756 7 47700029 to 47700045 16 + TSS region transcription start site region 66756
Tssr66757 7 47700132 to 47700136 4 + TSS region transcription start site region 66757
Gm28288 7 47708664 to 47708877 213 - pseudogene predicted gene 28288
Mrgprc3-ps 7 47718570 to 47719524 954 - pseudogene MAS-related GPR, member C3, pseudogene
Tssr66758 7 47727355 to 47727359 4 + TSS region transcription start site region 66758
Gm5733 7 47733002 to 47733940 938 - pseudogene predicted gene 5733
Tssr66759 7 47747316 to 47747347 31 + TSS region transcription start site region 66759
Tssr2269 7 47752610 to 47752613 3 - TSS region transcription start site region 2269
Tssr72606 7 47752632 to 47752638 6 - TSS region transcription start site region 72606
Gm22427 7 47752722 to 47752831 109 + miRNA gene predicted gene, 22427
Gm18348 7 47762856 to 47763675 819 - pseudogene predicted gene, 18348
Tssr66760 7 47772667 to 47772705 38 + TSS region transcription start site region 66760
Tssr66761 7 47772746 to 47772777 31 + TSS region transcription start site region 66761
Tssr66762 7 47772812 to 47772816 4 + TSS region transcription start site region 66762
Tssr66763 7 47772853 to 47772880 27 + TSS region transcription start site region 66763
Gm29563 7 47775717 to 47776212 495 - pseudogene predicted gene 29563
Mrgprc7-ps 7 47810037 to 47810988 951 + pseudogene MAS-related GPR, member C7, pseudogene
Gm18349 7 47823342 to 47824245 903 - pseudogene predicted gene, 18349
Mrgpra18-ps 7 47871201 to 47872107 906 - pseudogene MAS-related GPR, member A18, pseudogene
Gm18350 7 47886588 to 47887542 954 - pseudogene predicted gene, 18350
Gm5734 7 47915322 to 47916234 912 - pseudogene predicted gene 5734
Mrgprc2-ps 7 47967072 to 47968251 1179 - pseudogene MAS-related GPR, member C2, pseudogene
Mrgpra4 7 47980837 to 47982095 1258 - protein coding gene MAS-related GPR, member A4
Mrgprx1 7 48020971 to 48027597 6626 - protein coding gene MAS-related GPR, member X1
Mrgprb7-ps 7 48063867 to 48064830 963 - pseudogene MAS-related GPR, member B7, pseudogene
Gm28666 7 48095118 to 48095391 273 - pseudogene predicted gene 28666
Mrgprb12-ps 7 48096465 to 48097413 948 + pseudogene MAS-related GPR, member B12, pseudogene
Gm18351 7 48108883 to 48109667 784 - pseudogene predicted gene, 18351
Gm28665 7 48116772 to 48117441 669 - pseudogene predicted gene 28665
Tssr72607 7 48124219 to 48124222 3 - TSS region transcription start site region 72607
Cpgi19135 7 48137166 to 48138387 1221 CpG island CpG island 19135
Tssr72608 7 48137574 to 48137602 28 - TSS region transcription start site region 72608
2700078K13Rik 7 48138418 to 48138558 140 unclassified gene RIKEN cDNA 2700078K13 gene
Tssr72609 7 48167529 to 48167547 18 - TSS region transcription start site region 72609
Tssr72610 7 48167575 to 48167579 4 - TSS region transcription start site region 72610
Mrgprb5 7 48168017 to 48168985 968 - protein coding gene MAS-related GPR, member B5
D7Dcr19 7 48173162 to 48173256 94 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 19
Gm18352 7 48181856 to 48182417 561 - pseudogene predicted gene, 18352
Mrgprb4 7 48198213 to 48199178 965 - protein coding gene MAS-related GPR, member B4
Gm26950 7 48220204 to 48220840 636 - pseudogene predicted gene, 26950
Gm18356 7 48293221 to 48294733 1512 + pseudogene predicted gene, 18356
Mrgprb13 7 48311304 to 48312288 984 + protein coding gene MAS-related GPR, member B13
Gm18357 7 48363951 to 48364456 505 + pseudogene predicted gene, 18357
Mrgprb8 7 48388526 to 48389648 1122 + protein coding gene MAS-related GPR, member B8
Tssr72611 7 48393516 to 48393519 3 - TSS region transcription start site region 72611
Mrgprb1 7 48444113 to 48456342 12229 - protein coding gene MAS-related GPR, member B1
Tssr72612 7 48456240 to 48456251 11 - TSS region transcription start site region 72612
Tssr72613 7 48456290 to 48456319 29 - TSS region transcription start site region 72613
Tssr72614 7 48456331 to 48456345 14 - TSS region transcription start site region 72614
Mrgprx2 7 48478619 to 48499270 20651 - protein coding gene MAS-related GPR, member X2
Mrgprb2 7 48550965 to 48558086 7121 - protein coding gene MAS-related GPR, member B2
Tssr72615 7 48558066 to 48558094 28 - TSS region transcription start site region 72615
Mrgprb9-ps 7 48590802 to 48591693 891 + pseudogene MAS-related GPR, member B9, pseudogene
Gm18353 7 48609549 to 48610332 783 - pseudogene predicted gene, 18353
Mrgprb3 7 48642863 to 48643801 938 - protein coding gene MAS-related GPR, member B3
Tssr72616 7 48658073 to 48658113 40 - TSS region transcription start site region 72616
Mrgprb11-ps 7 48684622 to 48685560 938 - pseudogene MAS-related GPR, member B11, pseudogene
Tssr72617 7 48691759 to 48691774 15 - TSS region transcription start site region 72617
Tssr72618 7 48691776 to 48691781 5 - TSS region transcription start site region 72618
Tssr72619 7 48691785 to 48691807 22 - TSS region transcription start site region 72619
Tssr72620 7 48691824 to 48691829 5 - TSS region transcription start site region 72620
Gm45086 7 48724380 to 48726822 2442 - lincRNA gene predicted gene 45086
Tssr72621 7 48748186 to 48748201 15 - TSS region transcription start site region 72621
Gm32263 7 48755141 to 48768324 13183 - lncRNA gene predicted gene, 32263
Cpgi19136 7 48788762 to 48789547 785 CpG island CpG island 19136
Zdhhc13 7 48789003 to 48827437 38434 + protein coding gene zinc finger, DHHC domain containing 13
Tssr66764 7 48789017 to 48789060 43 + TSS region transcription start site region 66764
Tssr66765 7 48789062 to 48789081 19 + TSS region transcription start site region 66765
Gm45041 7 48796302 to 48799409 3107 + unclassified gene predicted gene 45041
Csrp3 7 48830398 to 48848033 17635 - protein coding gene cysteine and glycine-rich protein 3
Tssr72622 7 48843641 to 48843662 21 - TSS region transcription start site region 72622
Tssr72623 7 48843663 to 48843674 11 - TSS region transcription start site region 72623
Tssr72624 7 48845211 to 48845223 12 - TSS region transcription start site region 72624
Tssr72625 7 48845238 to 48845255 17 - TSS region transcription start site region 72625
Tssr72626 7 48848023 to 48848041 18 - TSS region transcription start site region 72626
E2f8 7 48866429 to 48881596 15167 - protein coding gene E2F transcription factor 8
Tssr72627 7 48866923 to 48866943 20 - TSS region transcription start site region 72627
Tssr66766 7 48877955 to 48877974 19 + TSS region transcription start site region 66766
Gm2788 7 48877958 to 48909109 31151 + lncRNA gene predicted gene 2788
Tssr66767 7 48877977 to 48877980 3 + TSS region transcription start site region 66767
Tssr72628 7 48878058 to 48878094 36 - TSS region transcription start site region 72628
Tssr72629 7 48878122 to 48878152 30 - TSS region transcription start site region 72629
Cpgi19137 7 48880483 to 48882473 1990 CpG island CpG island 19137
Tssr72630 7 48880979 to 48880990 11 - TSS region transcription start site region 72630
Tssr72631 7 48880992 to 48881030 38 - TSS region transcription start site region 72631
Tssr72632 7 48881032 to 48881050 18 - TSS region transcription start site region 72632
Tssr66768 7 48881332 to 48881365 33 + TSS region transcription start site region 66768
Tssr72633 7 48881604 to 48881619 15 - TSS region transcription start site region 72633
Tssr72634 7 48881641 to 48881671 30 - TSS region transcription start site region 72634
Tssr66769 7 48881864 to 48881866 2 + TSS region transcription start site region 66769
Tssr72635 7 48882351 to 48882354 3 - TSS region transcription start site region 72635
Tssr72636 7 48883335 to 48883343 8 - TSS region transcription start site region 72636
Tssr66770 7 48884809 to 48884816 7 + TSS region transcription start site region 66770
Tssr72637 7 48887066 to 48887090 24 - TSS region transcription start site region 72637
D7Mit272 7 48893011 to 48893129 118 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 272
D7Dcr20 7 48893016 to 48893137 121 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 20
Gm45282 7 48893685 to 48910062 16377 - lincRNA gene predicted gene 45282
Gm18559 7 48939515 to 48940118 603 - pseudogene predicted gene, 18559
D7Mit365 7 48948564 to 48948641 77 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 365
D7Mit312 7 48948567 to 48948641 74 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 312
Cpgi19138 7 48958921 to 48959687 766 CpG island CpG island 19138
Tssr66771 7 48959051 to 48959085 34 + TSS region transcription start site region 66771
Nav2 7 48959069 to 49610088 651019 + protein coding gene neuron navigator 2
Tssr66772 7 48959089 to 48959128 39 + TSS region transcription start site region 66772
Tssr66773 7 48963897 to 48963916 19 + TSS region transcription start site region 66773
Tssr66774 7 48975807 to 48975828 21 + TSS region transcription start site region 66774
Tssr66775 7 48978281 to 48978294 13 + TSS region transcription start site region 66775
Tssr66776 7 48984349 to 48984352 3 + TSS region transcription start site region 66776
Tssr66777 7 48990839 to 48990847 8 + TSS region transcription start site region 66777
Tssr66778 7 49018513 to 49018519 6 + TSS region transcription start site region 66778
Gm45207 7 49062437 to 49062581 144 - pseudogene predicted gene 45207
Ap7q 7 49065097 to 49065329 232 QTL alcohol preference 7 QTL
D7Mit69 7 49065097 to 49065329 232 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 69
Gm32849 7 49085083 to 49086981 1898 + lincRNA gene predicted gene, 32849
Cpgi19139 7 49120350 to 49120538 188 CpG island CpG island 19139
Cpgi19140 7 49121012 to 49121199 187 CpG island CpG island 19140
9130015G15Rik 7 49122334 to 49159819 37485 - antisense lncRNA gene RIKEN cDNA 9130015G15 gene
Tssr72638 7 49134274 to 49134281 7 - TSS region transcription start site region 72638
Tssr66779 7 49160422 to 49160434 12 + TSS region transcription start site region 66779
Tssr66780 7 49160508 to 49160520 12 + TSS region transcription start site region 66780
Tssr66781 7 49160699 to 49160712 13 + TSS region transcription start site region 66781
Tssr66782 7 49160716 to 49160723 7 + TSS region transcription start site region 66782
Tssr66783 7 49160727 to 49160768 41 + TSS region transcription start site region 66783
Tssr66784 7 49160776 to 49160788 12 + TSS region transcription start site region 66784
Tssr72639 7 49162148 to 49162171 23 - TSS region transcription start site region 72639
Gm37613 7 49195541 to 49199120 3579 + unclassified gene predicted gene, 37613
Cpgi19141 7 49245576 to 49247385 1809 CpG island CpG island 19141
Tssr66785 7 49246131 to 49246202 71 + TSS region transcription start site region 66785
Tssr66786 7 49246208 to 49246215 7 + TSS region transcription start site region 66786
Tssr66787 7 49246812 to 49246817 5 + TSS region transcription start site region 66787
Cpgi19142 7 49250030 to 49250220 190 CpG island CpG island 19142
Tssr66788 7 49276070 to 49276077 7 + TSS region transcription start site region 66788
Tssr66789 7 49276692 to 49276707 15 + TSS region transcription start site region 66789
Tssr66790 7 49276720 to 49276740 20 + TSS region transcription start site region 66790
Tssr66791 7 49290571 to 49290613 42 + TSS region transcription start site region 66791