Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:4743089-4843094

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kmt5c 7 4740115 to 4747514 7399 + protein coding gene lysine methyltransferase 5C
Cox6b2 7 4751792 to 4753094 1302 - protein coding gene cytochrome c oxidase subunit 6B2
Cpgi18249 7 4752003 to 4752166 163 CpG island CpG island 18249
Tssr70533 7 4752163 to 4752178 15 - TSS region transcription start site region 70533
Tssr70534 7 4752763 to 4752775 12 - TSS region transcription start site region 70534
Tssr70535 7 4753013 to 4753031 18 - TSS region transcription start site region 70535
Cpgi18250 7 4753193 to 4753387 194 CpG island CpG island 18250
Fam71e2 7 4753226 to 4771302 18076 - protein coding gene family with sequence similarity 71, member E2
Tssr70536 7 4770623 to 4770636 13 - TSS region transcription start site region 70536
Tssr64357 7 4771036 to 4771038 2 + TSS region transcription start site region 64357
Tssr70537 7 4771262 to 4771275 13 - TSS region transcription start site region 70537
Tssr70538 7 4771279 to 4771328 49 - TSS region transcription start site region 70538
Tssr70539 7 4771331 to 4771338 7 - TSS region transcription start site region 70539
Tssr70540 7 4771343 to 4771345 2 - TSS region transcription start site region 70540
Il11 7 4772378 to 4782857 10479 - protein coding gene interleukin 11
Cpgi18251 7 4776673 to 4777681 1008 CpG island CpG island 18251
Tssr70541 7 4778141 to 4778144 3 - TSS region transcription start site region 70541
Tmem190 7 4782937 to 4784341 1404 + protein coding gene transmembrane protein 190
Tssr64358 7 4782940 to 4782959 19 + TSS region transcription start site region 64358
Tssr64359 7 4782962 to 4782965 3 + TSS region transcription start site region 64359
Tssr70542 7 4783844 to 4783853 9 - TSS region transcription start site region 70542
Tmem238 7 4784785 to 4789560 4775 - protein coding gene transmembrane protein 238
Cpgi18252 7 4788732 to 4789951 1219 CpG island CpG island 18252
Tssr64360 7 4788930 to 4788953 23 + TSS region transcription start site region 64360
Tssr70543 7 4789541 to 4789614 73 - TSS region transcription start site region 70543
Tssr70544 7 4792324 to 4792330 6 - TSS region transcription start site region 70544
Cpgi18253 7 4792678 to 4793690 1012 CpG island CpG island 18253
Tssr70545 7 4792812 to 4792823 11 - TSS region transcription start site region 70545
Rpl28 7 4792888 to 4794562 1674 + protein coding gene ribosomal protein L28
Tssr64361 7 4792924 to 4793026 102 + TSS region transcription start site region 64361
Tssr64362 7 4793089 to 4793094 5 + TSS region transcription start site region 64362
Tssr64363 7 4793103 to 4793112 9 + TSS region transcription start site region 64363
Tssr64364 7 4793126 to 4793156 30 + TSS region transcription start site region 64364
Tssr64365 7 4793160 to 4793170 10 + TSS region transcription start site region 64365
Tssr64366 7 4793173 to 4793185 12 + TSS region transcription start site region 64366
Ube2s 7 4808014 to 4812340 4326 - protein coding gene ubiquitin-conjugating enzyme E2S
Cpgi18254 7 4811656 to 4812986 1330 CpG island CpG island 18254
Tssr70546 7 4812112 to 4812147 35 - TSS region transcription start site region 70546
Tssr70547 7 4812351 to 4812362 11 - TSS region transcription start site region 70547
Tssr70548 7 4812543 to 4812562 19 - TSS region transcription start site region 70548
Tssr64367 7 4812936 to 4813030 94 + TSS region transcription start site region 64367
Tammq5 7 4818048 to 4818048 0 QTL tibialis anterior muscle mass QTL 5
Gmmq5 7 4818048 to 4818048 0 QTL gastrocnemius muscle mass QTL 5
Edlmmq6 7 4818048 to 4818048 0 QTL extensor digitorum longus muscle mass QTL 6
Shisa7 7 4825552 to 4844696 19144 - protein coding gene shisa family member 7
Cpgi18255 7 4829926 to 4830270 344 CpG island CpG island 18255
Cpgi18256 7 4830632 to 4830901 269 CpG island CpG island 18256
Cpgi18257 7 4835812 to 4837055 1243 CpG island CpG island 18257
Gm36127 7 4841311 to 4844985 3674 + lncRNA gene predicted gene, 36127