Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:47000837-48962095

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183 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spty2d1 7 46990396 to 47008411 18015 - protein coding gene SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
D7Ertd413e 7 47006610 to 47006834 224 DNA segment DNA segment, Chr 7, ERATO Doi 413, expressed
Cpgi19132 7 47007644 to 47008833 1189 CpG island CpG island 19132
Tssr72577 7 47008215 to 47008231 16 - TSS region transcription start site region 72577
Tssr72578 7 47008246 to 47008275 29 - TSS region transcription start site region 72578
Tssr72579 7 47008397 to 47008421 24 - TSS region transcription start site region 72579
Gm32031 7 47008488 to 47009013 525 + bidirectional promoter lncRNA gene predicted gene, 32031
Tssr66741 7 47008542 to 47008566 24 + TSS region transcription start site region 66741
Tssr72580 7 47008818 to 47008822 4 - TSS region transcription start site region 72580
Tssr72581 7 47015781 to 47015785 4 - TSS region transcription start site region 72581
Tssr66742 7 47021194 to 47021237 43 + TSS region transcription start site region 66742
Tssr66743 7 47021289 to 47021301 12 + TSS region transcription start site region 66743
Gm45474 7 47049889 to 47050296 407 - lincRNA gene predicted gene 45474
Cpgi19133 7 47050321 to 47051156 835 CpG island CpG island 19133
Tssr66744 7 47050610 to 47050621 11 + TSS region transcription start site region 66744
Tssr66745 7 47050628 to 47050646 18 + TSS region transcription start site region 66745
Tmem86a 7 47050640 to 47054776 4136 + protein coding gene transmembrane protein 86A
Tssr2268 7 47050647 to 47050648 1 + TSS region transcription start site region 2268
Tssr66746 7 47050658 to 47050680 22 + TSS region transcription start site region 66746
Tssr66747 7 47050695 to 47050702 7 + TSS region transcription start site region 66747
Tssr66748 7 47052664 to 47052673 9 + TSS region transcription start site region 66748
Tssr66749 7 47053023 to 47053030 7 + TSS region transcription start site region 66749
Tssr66750 7 47053972 to 47053984 12 + TSS region transcription start site region 66750
Tssr66751 7 47054579 to 47054618 39 + TSS region transcription start site region 66751
LOC102637012 7 47057353 to 47074687 17334 - protein coding gene immunoglobulin superfamily member 22-like
Ptpn5 7 47077795 to 47133684 55889 - protein coding gene protein tyrosine phosphatase, non-receptor type 5
Mir7056 7 47083166 to 47083224 58 - miRNA gene microRNA 7056
Tssr72582 7 47091378 to 47091389 11 - TSS region transcription start site region 72582
Tssr72583 7 47091411 to 47091418 7 - TSS region transcription start site region 72583
Tssr72584 7 47091424 to 47091433 9 - TSS region transcription start site region 72584
Tssr72585 7 47091714 to 47091725 11 - TSS region transcription start site region 72585
Gm14377 7 47108715 to 47112714 3999 + antisense lncRNA gene predicted gene 14377
Cpgi19134 7 47131868 to 47133187 1319 CpG island CpG island 19134
Tssr72586 7 47132310 to 47132388 78 - TSS region transcription start site region 72586
Tssr72587 7 47132398 to 47132412 14 - TSS region transcription start site region 72587
Tssr72588 7 47132420 to 47132436 16 - TSS region transcription start site region 72588
Tssr72589 7 47132486 to 47132562 76 - TSS region transcription start site region 72589
Tssr72590 7 47132621 to 47132637 16 - TSS region transcription start site region 72590
Tssr72591 7 47132698 to 47132712 14 - TSS region transcription start site region 72591
Tssr72592 7 47132725 to 47132750 25 - TSS region transcription start site region 72592
Tssr72593 7 47133395 to 47133413 18 - TSS region transcription start site region 72593
Tssr72594 7 47133591 to 47133629 38 - TSS region transcription start site region 72594
Tssr72595 7 47133645 to 47133656 11 - TSS region transcription start site region 72595
Tssr72596 7 47133697 to 47133720 23 - TSS region transcription start site region 72596
Gm44969 7 47142157 to 47144322 2165 - lincRNA gene predicted gene 44969
Tssr72597 7 47185057 to 47185061 4 - TSS region transcription start site region 72597
Mrgpra6 7 47185717 to 47189416 3699 - protein coding gene MAS-related GPR, member A6
Tssr72598 7 47204931 to 47204976 45 - TSS region transcription start site region 72598
Gm18347 7 47212683 to 47213410 727 - pseudogene predicted gene, 18347
Mrgpra9 7 47234919 to 47252848 17929 - protein coding gene MAS-related GPR, member A9
Tssr72599 7 47252827 to 47252832 5 - TSS region transcription start site region 72599
Tssr72600 7 47252850 to 47252861 11 - TSS region transcription start site region 72600
Tssr72601 7 47252864 to 47252873 9 - TSS region transcription start site region 72601
Tssr72602 7 47252874 to 47252883 9 - TSS region transcription start site region 72602
Tssr72603 7 47252916 to 47252923 7 - TSS region transcription start site region 72603
Tssr72604 7 47252953 to 47252962 9 - TSS region transcription start site region 72604
Tssr72605 7 47252996 to 47253004 8 - TSS region transcription start site region 72605
Tssr66752 7 47271823 to 47271831 8 + TSS region transcription start site region 66752
Mrgprx3-ps 7 47309378 to 47310295 917 - pseudogene MAS-related GPR, member X3, pseudogene
Mrgpra1 7 47334875 to 47354240 19365 - protein coding gene MAS-related GPR, member A1
Del(7Mrgpra1-Mrgprb4)1And 7 47334875 to 48199178 864303 chromosomal deletion deletion, Chr 7, David J Anderson 1
Gm45085 7 47349453 to 47349893 440 + pseudogene predicted gene 45085
D7Mit226 7 47371830 to 47372017 187 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 226
Gm29479 7 47390616 to 47391070 454 - pseudogene predicted gene 29479
D7Mit170 7 47402332 to 47402463 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 170
Gm25326 7 47413834 to 47413940 106 + snRNA gene predicted gene, 25326
Mrgpra2a 7 47426328 to 47452139 25811 - protein coding gene MAS-related GPR, member A2A
Mrgpra2b 7 47463799 to 47489585 25786 - protein coding gene MAS-related GPR, member A2B
Gm7255 7 47502453 to 47503307 854 - pseudogene predicted gene 7255
Tssr66753 7 47516073 to 47516078 5 + TSS region transcription start site region 66753
Mrgprc4-ps 7 47539257 to 47540220 963 - pseudogene MAS-related GPR, member C4, pseudogene
Gm9717 7 47555375 to 47556313 938 - pseudogene predicted gene 9717
Mrgpra14 7 47555376 to 47556288 912 - protein coding gene MAS-related GPR, member A14
Gm9322 7 47565321 to 47566278 957 - pseudogene predicted gene 9322
Mrgpra3 7 47588950 to 47601372 12422 - protein coding gene MAS-related GPR, member A3
Mrgprc1-ps 7 47611389 to 47612340 951 - pseudogene MAS-related GPR, member C1, pseudogene
Gm2707 7 47668095 to 47668808 713 - pseudogene predicted gene 2707
Tssr66754 7 47699936 to 47699950 14 + TSS region transcription start site region 66754
Tssr66755 7 47699964 to 47699968 4 + TSS region transcription start site region 66755
Tssr66756 7 47700029 to 47700045 16 + TSS region transcription start site region 66756
Tssr66757 7 47700132 to 47700136 4 + TSS region transcription start site region 66757
Gm28288 7 47708664 to 47708877 213 - pseudogene predicted gene 28288
Mrgprc3-ps 7 47718570 to 47719524 954 - pseudogene MAS-related GPR, member C3, pseudogene
Tssr66758 7 47727355 to 47727359 4 + TSS region transcription start site region 66758
Gm5733 7 47733002 to 47733940 938 - pseudogene predicted gene 5733
Tssr66759 7 47747316 to 47747347 31 + TSS region transcription start site region 66759
Tssr2269 7 47752610 to 47752613 3 - TSS region transcription start site region 2269
Tssr72606 7 47752632 to 47752638 6 - TSS region transcription start site region 72606
Gm22427 7 47752722 to 47752831 109 + miRNA gene predicted gene, 22427
Gm18348 7 47762856 to 47763675 819 - pseudogene predicted gene, 18348
Tssr66760 7 47772667 to 47772705 38 + TSS region transcription start site region 66760
Tssr66761 7 47772746 to 47772777 31 + TSS region transcription start site region 66761
Tssr66762 7 47772812 to 47772816 4 + TSS region transcription start site region 66762
Tssr66763 7 47772853 to 47772880 27 + TSS region transcription start site region 66763
Gm29563 7 47775717 to 47776212 495 - pseudogene predicted gene 29563
Mrgprc7-ps 7 47810037 to 47810988 951 + pseudogene MAS-related GPR, member C7, pseudogene
Gm18349 7 47823342 to 47824245 903 - pseudogene predicted gene, 18349
Mrgpra18-ps 7 47871201 to 47872107 906 - pseudogene MAS-related GPR, member A18, pseudogene
Gm18350 7 47886588 to 47887542 954 - pseudogene predicted gene, 18350
Gm5734 7 47915322 to 47916234 912 - pseudogene predicted gene 5734
Mrgprc2-ps 7 47967072 to 47968251 1179 - pseudogene MAS-related GPR, member C2, pseudogene
Mrgpra4 7 47980837 to 47982095 1258 - protein coding gene MAS-related GPR, member A4
Mrgprx1 7 48020971 to 48027597 6626 - protein coding gene MAS-related GPR, member X1
Mrgprb7-ps 7 48063867 to 48064830 963 - pseudogene MAS-related GPR, member B7, pseudogene
Gm28666 7 48095118 to 48095391 273 - pseudogene predicted gene 28666
Mrgprb12-ps 7 48096465 to 48097413 948 + pseudogene MAS-related GPR, member B12, pseudogene
Gm18351 7 48108883 to 48109667 784 - pseudogene predicted gene, 18351
Gm28665 7 48116772 to 48117441 669 - pseudogene predicted gene 28665
Tssr72607 7 48124219 to 48124222 3 - TSS region transcription start site region 72607
Cpgi19135 7 48137166 to 48138387 1221 CpG island CpG island 19135
Tssr72608 7 48137574 to 48137602 28 - TSS region transcription start site region 72608
2700078K13Rik 7 48138418 to 48138558 140 unclassified gene RIKEN cDNA 2700078K13 gene
Tssr72609 7 48167529 to 48167547 18 - TSS region transcription start site region 72609
Tssr72610 7 48167575 to 48167579 4 - TSS region transcription start site region 72610
Mrgprb5 7 48168017 to 48168985 968 - protein coding gene MAS-related GPR, member B5
D7Dcr19 7 48173162 to 48173256 94 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 19
Gm18352 7 48181856 to 48182417 561 - pseudogene predicted gene, 18352
Mrgprb4 7 48198213 to 48199178 965 - protein coding gene MAS-related GPR, member B4
Gm26950 7 48220204 to 48220840 636 - pseudogene predicted gene, 26950
Gm18356 7 48293221 to 48294733 1512 + pseudogene predicted gene, 18356
Mrgprb13 7 48311304 to 48312288 984 + protein coding gene MAS-related GPR, member B13
Gm18357 7 48363951 to 48364456 505 + pseudogene predicted gene, 18357
Mrgprb8 7 48388526 to 48389648 1122 + protein coding gene MAS-related GPR, member B8
Tssr72611 7 48393516 to 48393519 3 - TSS region transcription start site region 72611
Mrgprb1 7 48444113 to 48456342 12229 - protein coding gene MAS-related GPR, member B1
Tssr72612 7 48456240 to 48456251 11 - TSS region transcription start site region 72612
Tssr72613 7 48456290 to 48456319 29 - TSS region transcription start site region 72613
Tssr72614 7 48456331 to 48456345 14 - TSS region transcription start site region 72614
Mrgprx2 7 48478619 to 48499270 20651 - protein coding gene MAS-related GPR, member X2
Mrgprb2 7 48550965 to 48558086 7121 - protein coding gene MAS-related GPR, member B2
Tssr72615 7 48558066 to 48558094 28 - TSS region transcription start site region 72615
Mrgprb9-ps 7 48590802 to 48591693 891 + pseudogene MAS-related GPR, member B9, pseudogene
Gm18353 7 48609549 to 48610332 783 - pseudogene predicted gene, 18353
Mrgprb3 7 48642863 to 48643801 938 - protein coding gene MAS-related GPR, member B3
Tssr72616 7 48658073 to 48658113 40 - TSS region transcription start site region 72616
Mrgprb11-ps 7 48684622 to 48685560 938 - pseudogene MAS-related GPR, member B11, pseudogene
Tssr72617 7 48691759 to 48691774 15 - TSS region transcription start site region 72617
Tssr72618 7 48691776 to 48691781 5 - TSS region transcription start site region 72618
Tssr72619 7 48691785 to 48691807 22 - TSS region transcription start site region 72619
Tssr72620 7 48691824 to 48691829 5 - TSS region transcription start site region 72620
Gm45086 7 48724380 to 48726822 2442 - lincRNA gene predicted gene 45086
Tssr72621 7 48748186 to 48748201 15 - TSS region transcription start site region 72621
Gm32263 7 48755141 to 48768324 13183 - lncRNA gene predicted gene, 32263
Cpgi19136 7 48788762 to 48789547 785 CpG island CpG island 19136
Zdhhc13 7 48789003 to 48827437 38434 + protein coding gene zinc finger, DHHC domain containing 13
Tssr66764 7 48789017 to 48789060 43 + TSS region transcription start site region 66764
Tssr66765 7 48789062 to 48789081 19 + TSS region transcription start site region 66765
Gm45041 7 48796302 to 48799409 3107 + unclassified gene predicted gene 45041
Csrp3 7 48830398 to 48848033 17635 - protein coding gene cysteine and glycine-rich protein 3
Tssr72622 7 48843641 to 48843662 21 - TSS region transcription start site region 72622
Tssr72623 7 48843663 to 48843674 11 - TSS region transcription start site region 72623
Tssr72624 7 48845211 to 48845223 12 - TSS region transcription start site region 72624
Tssr72625 7 48845238 to 48845255 17 - TSS region transcription start site region 72625
Tssr72626 7 48848023 to 48848041 18 - TSS region transcription start site region 72626
E2f8 7 48866429 to 48881596 15167 - protein coding gene E2F transcription factor 8
Tssr72627 7 48866923 to 48866943 20 - TSS region transcription start site region 72627
Tssr66766 7 48877955 to 48877974 19 + TSS region transcription start site region 66766
Gm2788 7 48877958 to 48909109 31151 + lncRNA gene predicted gene 2788
Tssr66767 7 48877977 to 48877980 3 + TSS region transcription start site region 66767
Tssr72628 7 48878058 to 48878094 36 - TSS region transcription start site region 72628
Tssr72629 7 48878122 to 48878152 30 - TSS region transcription start site region 72629
Cpgi19137 7 48880483 to 48882473 1990 CpG island CpG island 19137
Tssr72630 7 48880979 to 48880990 11 - TSS region transcription start site region 72630
Tssr72631 7 48880992 to 48881030 38 - TSS region transcription start site region 72631
Tssr72632 7 48881032 to 48881050 18 - TSS region transcription start site region 72632
Tssr66768 7 48881332 to 48881365 33 + TSS region transcription start site region 66768
Tssr72633 7 48881604 to 48881619 15 - TSS region transcription start site region 72633
Tssr72634 7 48881641 to 48881671 30 - TSS region transcription start site region 72634
Tssr66769 7 48881864 to 48881866 2 + TSS region transcription start site region 66769
Tssr72635 7 48882351 to 48882354 3 - TSS region transcription start site region 72635
Tssr72636 7 48883335 to 48883343 8 - TSS region transcription start site region 72636
Tssr66770 7 48884809 to 48884816 7 + TSS region transcription start site region 66770
Tssr72637 7 48887066 to 48887090 24 - TSS region transcription start site region 72637
D7Mit272 7 48893011 to 48893129 118 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 272
D7Dcr20 7 48893016 to 48893137 121 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 20
Gm45282 7 48893685 to 48910062 16377 - lincRNA gene predicted gene 45282
Gm18559 7 48939515 to 48940118 603 - pseudogene predicted gene, 18559
D7Mit365 7 48948564 to 48948641 77 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 365
D7Mit312 7 48948567 to 48948641 74 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 312
Cpgi19138 7 48958921 to 48959687 766 CpG island CpG island 19138
Tssr66771 7 48959051 to 48959085 34 + TSS region transcription start site region 66771
Nav2 7 48959069 to 49610088 651019 + protein coding gene neuron navigator 2
Tssr66772 7 48959089 to 48959128 39 + TSS region transcription start site region 66772