Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:46965717-47409416

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39012 7 46957540 to 46970301 12761 + lncRNA gene predicted gene, 39012
Gm19248 7 46967248 to 46967357 109 + pseudogene predicted gene, 19248
C86187 7 46967747 to 46975911 8164 - lincRNA gene expressed sequence C86187
Gm31941 7 46975366 to 46975715 349 + pseudogene predicted gene, 31941
Tssr72576 7 46975903 to 46975913 10 - TSS region transcription start site region 72576
Gm9999 7 46983580 to 46987803 4223 + protein coding gene predicted gene 9999
Tssr66739 7 46983593 to 46983658 65 + TSS region transcription start site region 66739
Tssr66740 7 46986814 to 46986831 17 + TSS region transcription start site region 66740
Spty2d1 7 46990396 to 47008411 18015 - protein coding gene SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
D7Ertd413e 7 47006610 to 47006834 224 DNA segment DNA segment, Chr 7, ERATO Doi 413, expressed
Cpgi19132 7 47007644 to 47008833 1189 CpG island CpG island 19132
Tssr72577 7 47008215 to 47008231 16 - TSS region transcription start site region 72577
Tssr72578 7 47008246 to 47008275 29 - TSS region transcription start site region 72578
Tssr72579 7 47008397 to 47008421 24 - TSS region transcription start site region 72579
Gm32031 7 47008488 to 47009013 525 + bidirectional promoter lncRNA gene predicted gene, 32031
Tssr66741 7 47008542 to 47008566 24 + TSS region transcription start site region 66741
Tssr72580 7 47008818 to 47008822 4 - TSS region transcription start site region 72580
Tssr72581 7 47015781 to 47015785 4 - TSS region transcription start site region 72581
Tssr66742 7 47021194 to 47021237 43 + TSS region transcription start site region 66742
Tssr66743 7 47021289 to 47021301 12 + TSS region transcription start site region 66743
Gm45474 7 47049889 to 47050296 407 - lincRNA gene predicted gene 45474
Cpgi19133 7 47050321 to 47051156 835 CpG island CpG island 19133
Tssr66744 7 47050610 to 47050621 11 + TSS region transcription start site region 66744
Tssr66745 7 47050628 to 47050646 18 + TSS region transcription start site region 66745
Tmem86a 7 47050640 to 47054776 4136 + protein coding gene transmembrane protein 86A
Tssr2268 7 47050647 to 47050648 1 + TSS region transcription start site region 2268
Tssr66746 7 47050658 to 47050680 22 + TSS region transcription start site region 66746
Tssr66747 7 47050695 to 47050702 7 + TSS region transcription start site region 66747
Tssr66748 7 47052664 to 47052673 9 + TSS region transcription start site region 66748
Tssr66749 7 47053023 to 47053030 7 + TSS region transcription start site region 66749
Tssr66750 7 47053972 to 47053984 12 + TSS region transcription start site region 66750
Tssr66751 7 47054579 to 47054618 39 + TSS region transcription start site region 66751
LOC102637012 7 47057353 to 47074687 17334 - protein coding gene immunoglobulin superfamily member 22-like
Ptpn5 7 47077795 to 47133684 55889 - protein coding gene protein tyrosine phosphatase, non-receptor type 5
Mir7056 7 47083166 to 47083224 58 - miRNA gene microRNA 7056
Tssr72582 7 47091378 to 47091389 11 - TSS region transcription start site region 72582
Tssr72583 7 47091411 to 47091418 7 - TSS region transcription start site region 72583
Tssr72584 7 47091424 to 47091433 9 - TSS region transcription start site region 72584
Tssr72585 7 47091714 to 47091725 11 - TSS region transcription start site region 72585
Gm14377 7 47108715 to 47112714 3999 + antisense lncRNA gene predicted gene 14377
Cpgi19134 7 47131868 to 47133187 1319 CpG island CpG island 19134
Tssr72586 7 47132310 to 47132388 78 - TSS region transcription start site region 72586
Tssr72587 7 47132398 to 47132412 14 - TSS region transcription start site region 72587
Tssr72588 7 47132420 to 47132436 16 - TSS region transcription start site region 72588
Tssr72589 7 47132486 to 47132562 76 - TSS region transcription start site region 72589
Tssr72590 7 47132621 to 47132637 16 - TSS region transcription start site region 72590
Tssr72591 7 47132698 to 47132712 14 - TSS region transcription start site region 72591
Tssr72592 7 47132725 to 47132750 25 - TSS region transcription start site region 72592
Tssr72593 7 47133395 to 47133413 18 - TSS region transcription start site region 72593
Tssr72594 7 47133591 to 47133629 38 - TSS region transcription start site region 72594
Tssr72595 7 47133645 to 47133656 11 - TSS region transcription start site region 72595
Tssr72596 7 47133697 to 47133720 23 - TSS region transcription start site region 72596
Gm44969 7 47142157 to 47144322 2165 - lincRNA gene predicted gene 44969
Tssr72597 7 47185057 to 47185061 4 - TSS region transcription start site region 72597
Mrgpra6 7 47185717 to 47189416 3699 - protein coding gene MAS-related GPR, member A6
Tssr72598 7 47204931 to 47204976 45 - TSS region transcription start site region 72598
Gm18347 7 47212683 to 47213410 727 - pseudogene predicted gene, 18347
Mrgpra9 7 47234919 to 47252848 17929 - protein coding gene MAS-related GPR, member A9
Tssr72599 7 47252827 to 47252832 5 - TSS region transcription start site region 72599
Tssr72600 7 47252850 to 47252861 11 - TSS region transcription start site region 72600
Tssr72601 7 47252864 to 47252873 9 - TSS region transcription start site region 72601
Tssr72602 7 47252874 to 47252883 9 - TSS region transcription start site region 72602
Tssr72603 7 47252916 to 47252923 7 - TSS region transcription start site region 72603
Tssr72604 7 47252953 to 47252962 9 - TSS region transcription start site region 72604
Tssr72605 7 47252996 to 47253004 8 - TSS region transcription start site region 72605
Tssr66752 7 47271823 to 47271831 8 + TSS region transcription start site region 66752
Mrgprx3-ps 7 47309378 to 47310295 917 - pseudogene MAS-related GPR, member X3, pseudogene
Del(7Mrgpra1-Mrgprb4)1And 7 47334875 to 48199178 864303 chromosomal deletion deletion, Chr 7, David J Anderson 1
Mrgpra1 7 47334875 to 47354240 19365 - protein coding gene MAS-related GPR, member A1
Gm45085 7 47349453 to 47349893 440 + pseudogene predicted gene 45085
D7Mit226 7 47371830 to 47372017 187 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 226
Gm29479 7 47390616 to 47391070 454 - pseudogene predicted gene 29479
D7Mit170 7 47402332 to 47402463 131 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 170