Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:46863216-47018522

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ldhc 7 46861263 to 46878142 16879 + protein coding gene lactate dehydrogenase C
Tssr66732 7 46873012 to 46873031 19 + TSS region transcription start site region 66732
Tssr66733 7 46877909 to 46877953 44 + TSS region transcription start site region 66733
Tsg101 7 46889027 to 46919971 30944 - protein coding gene tumor susceptibility gene 101
Tssr72571 7 46909008 to 46909037 29 - TSS region transcription start site region 72571
Tssr66734 7 46912300 to 46912303 3 + TSS region transcription start site region 66734
Gm45628 7 46915990 to 46916263 273 + pseudogene predicted gene 45628
Cpgi19130 7 46919465 to 46920374 909 CpG island CpG island 19130
Tssr72572 7 46919877 to 46919908 31 - TSS region transcription start site region 72572
Tssr72573 7 46919915 to 46919986 71 - TSS region transcription start site region 72573
Tssr66735 7 46919993 to 46920029 36 + TSS region transcription start site region 66735
Tssr66736 7 46920038 to 46920052 14 + TSS region transcription start site region 66736
Tssr66737 7 46920149 to 46920176 27 + TSS region transcription start site region 66737
Tssr66738 7 46920187 to 46920194 7 + TSS region transcription start site region 66738
Uevld 7 46923216 to 46958522 35306 - protein coding gene UEV and lactate/malate dehyrogenase domains
Gm45737 7 46927813 to 46929424 1611 - unclassified gene predicted gene 45737
Tssr2267 7 46954338 to 46954341 3 + TSS region transcription start site region 2267
Gm39012 7 46957540 to 46970301 12761 + lncRNA gene predicted gene, 39012
Cpgi19131 7 46958074 to 46958677 603 CpG island CpG island 19131
Tssr72574 7 46958444 to 46958474 30 - TSS region transcription start site region 72574
Tssr72575 7 46958475 to 46958480 5 - TSS region transcription start site region 72575
Gm19248 7 46967248 to 46967357 109 + pseudogene predicted gene, 19248
C86187 7 46967747 to 46975911 8164 - lincRNA gene expressed sequence C86187
Gm31941 7 46975366 to 46975715 349 + pseudogene predicted gene, 31941
Tssr72576 7 46975903 to 46975913 10 - TSS region transcription start site region 72576
Gm9999 7 46983580 to 46987803 4223 + protein coding gene predicted gene 9999
Tssr66739 7 46983593 to 46983658 65 + TSS region transcription start site region 66739
Tssr66740 7 46986814 to 46986831 17 + TSS region transcription start site region 66740
Spty2d1 7 46990396 to 47008411 18015 - protein coding gene SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
D7Ertd413e 7 47006610 to 47006834 224 DNA segment DNA segment, Chr 7, ERATO Doi 413, expressed
Cpgi19132 7 47007644 to 47008833 1189 CpG island CpG island 19132
Tssr72577 7 47008215 to 47008231 16 - TSS region transcription start site region 72577
Tssr72578 7 47008246 to 47008275 29 - TSS region transcription start site region 72578
Tssr72579 7 47008397 to 47008421 24 - TSS region transcription start site region 72579
Gm32031 7 47008488 to 47009013 525 + bidirectional promoter lncRNA gene predicted gene, 32031
Tssr66741 7 47008542 to 47008566 24 + TSS region transcription start site region 66741
Tssr72580 7 47008818 to 47008822 4 - TSS region transcription start site region 72580
Tssr72581 7 47015781 to 47015785 4 - TSS region transcription start site region 72581