Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:46722833-46872837

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prt5 7 34912407 to 46742980 11830573 heritable phenotypic marker protease 5
Saa4 7 46727998 to 46732543 4545 - protein coding gene serum amyloid A 4
Tssr2265 7 46728564 to 46728605 41 + TSS region transcription start site region 2265
Tssr72554 7 46728598 to 46728628 30 - TSS region transcription start site region 72554
Tssr72555 7 46728688 to 46728716 28 - TSS region transcription start site region 72555
Tssr72556 7 46728746 to 46728765 19 - TSS region transcription start site region 72556
Tssr72557 7 46728796 to 46728805 9 - TSS region transcription start site region 72557
Tssr72558 7 46728822 to 46728831 9 - TSS region transcription start site region 72558
Tssr72559 7 46728871 to 46728894 23 - TSS region transcription start site region 72559
Tssr72560 7 46728983 to 46728990 7 - TSS region transcription start site region 72560
Tssr72561 7 46729162 to 46729169 7 - TSS region transcription start site region 72561
Tssr72562 7 46732562 to 46732571 9 - TSS region transcription start site region 72562
Tssr72563 7 46732581 to 46732611 30 - TSS region transcription start site region 72563
Saa-ps 7 46734688 to 46735583 895 - pseudogene serum amyloid A, pseudogene
Saa1 7 46740497 to 46742980 2483 - protein coding gene serum amyloid A 1
Tssr72564 7 46742979 to 46742980 1 - TSS region transcription start site region 72564
D7Mit28 7 46751183 to 46751346 163 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 28
Saa2 7 46751790 to 46754313 2523 + protein coding gene serum amyloid A 2
Tssr66700 7 46751832 to 46751835 3 + TSS region transcription start site region 66700
Tssr66701 7 46752353 to 46752359 6 + TSS region transcription start site region 66701
Tssr66702 7 46753416 to 46753435 19 + TSS region transcription start site region 66702
Tssr66703 7 46753439 to 46753450 11 + TSS region transcription start site region 66703
Tssr66704 7 46753494 to 46753508 14 + TSS region transcription start site region 66704
Tssr66705 7 46754265 to 46754272 7 + TSS region transcription start site region 66705
Hps5 7 46760466 to 46796064 35598 - protein coding gene HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
Gm45309 7 46784746 to 46785546 800 - sense intronic lncRNA gene predicted gene 45309
Cpgi19127 7 46795391 to 46796643 1252 CpG island CpG island 19127
Tssr72565 7 46795661 to 46795722 61 - TSS region transcription start site region 72565
Tssr66706 7 46795797 to 46795827 30 + TSS region transcription start site region 66706
Tssr72566 7 46796031 to 46796085 54 - TSS region transcription start site region 72566
Tssr66707 7 46796088 to 46796134 46 + TSS region transcription start site region 66707
Gtf2h1 7 46796103 to 46823800 27697 + protein coding gene general transcription factor II H, polypeptide 1
Tssr66708 7 46796151 to 46796156 5 + TSS region transcription start site region 66708
Tssr66709 7 46797833 to 46797837 4 + TSS region transcription start site region 66709
Gm9392 7 46820864 to 46821417 553 - pseudogene predicted pseudogene 9392
Tssr72567 7 46827584 to 46827614 30 - TSS region transcription start site region 72567
Tssr66710 7 46831008 to 46831026 18 + TSS region transcription start site region 66710
Tssr66711 7 46832396 to 46832415 19 + TSS region transcription start site region 66711
Gm5331 7 46832418 to 46839328 6910 + pseudogene predicted gene 5331
Tssr66712 7 46832435 to 46832463 28 + TSS region transcription start site region 66712
Gm45308 7 46832464 to 46832878 414 + pseudogene predicted gene 45308
Tssr72568 7 46833388 to 46833393 5 - TSS region transcription start site region 72568
Tssr66713 7 46838454 to 46838477 23 + TSS region transcription start site region 66713
Tssr2266 7 46839044 to 46839061 17 + TSS region transcription start site region 2266
Tssr66714 7 46841517 to 46841538 21 + TSS region transcription start site region 66714
Cpgi19128 7 46845320 to 46846538 1218 CpG island CpG island 19128
Ldha 7 46845804 to 46855627 9823 + protein coding gene lactate dehydrogenase A
Tssr66715 7 46845832 to 46845848 16 + TSS region transcription start site region 66715
Tssr66716 7 46846215 to 46846237 22 + TSS region transcription start site region 66716
Tssr66717 7 46846284 to 46846303 19 + TSS region transcription start site region 66717
Cpgi19129 7 46846950 to 46847215 265 CpG island CpG island 19129
Tssr66718 7 46847102 to 46847118 16 + TSS region transcription start site region 66718
Tssr66719 7 46847128 to 46847150 22 + TSS region transcription start site region 66719
Tssr66720 7 46847155 to 46847168 13 + TSS region transcription start site region 66720
Tssr66721 7 46847200 to 46847207 7 + TSS region transcription start site region 66721
Tssr66722 7 46847529 to 46847533 4 + TSS region transcription start site region 66722
D7Mit29 7 46848578 to 46848758 180 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 29
Tssr66723 7 46850201 to 46850215 14 + TSS region transcription start site region 66723
Tssr66724 7 46850217 to 46850230 13 + TSS region transcription start site region 66724
Tssr66725 7 46850234 to 46850253 19 + TSS region transcription start site region 66725
Tssr66726 7 46853167 to 46853171 4 + TSS region transcription start site region 66726
Gm39011 7 46855507 to 46861231 5724 - lncRNA gene predicted gene, 39011
Tssr72569 7 46855623 to 46855626 3 - TSS region transcription start site region 72569
Tssr72570 7 46861180 to 46861187 7 - TSS region transcription start site region 72570
Tssr66727 7 46861228 to 46861245 17 + TSS region transcription start site region 66727
Tssr66728 7 46861253 to 46861281 28 + TSS region transcription start site region 66728
Ldhc 7 46861263 to 46878142 16879 + protein coding gene lactate dehydrogenase C
Tssr66729 7 46861431 to 46861436 5 + TSS region transcription start site region 66729
Tssr66730 7 46861452 to 46861461 9 + TSS region transcription start site region 66730
Tssr66731 7 46861481 to 46861494 13 + TSS region transcription start site region 66731