Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:46343159-46739807

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700025L06Rik 7 46345771 to 46349373 3602 - lincRNA gene RIKEN cDNA 1700025L06 gene
Cpgi19119 7 46348775 to 46349234 459 CpG island CpG island 19119
Tssr72524 7 46349016 to 46349023 7 - TSS region transcription start site region 72524
Tssr72525 7 46349048 to 46349059 11 - TSS region transcription start site region 72525
Gm45923 7 46371403 to 46372492 1089 + lncRNA gene predicted gene, 45923
Tssr66676 7 46376448 to 46376459 11 + TSS region transcription start site region 66676
Tssr66677 7 46376467 to 46376480 13 + TSS region transcription start site region 66677
Myod1 7 46376474 to 46379092 2618 + protein coding gene myogenic differentiation 1
Cpgi19120 7 46376501 to 46377843 1342 CpG island CpG island 19120
Cpgi19121 7 46378102 to 46378452 350 CpG island CpG island 19121
Cpgi19122 7 46395813 to 46398658 2845 CpG island CpG island 19122
Tssr66678 7 46396248 to 46396258 10 + TSS region transcription start site region 66678
Tssr66679 7 46396439 to 46396539 100 + TSS region transcription start site region 66679
Kcnc1 7 46396497 to 46438704 42207 + protein coding gene potassium voltage gated channel, Shaw-related subfamily, member 1
Tssr66680 7 46396540 to 46396557 17 + TSS region transcription start site region 66680
Tssr66681 7 46396661 to 46396669 8 + TSS region transcription start site region 66681
Tssr66682 7 46396673 to 46396686 13 + TSS region transcription start site region 66682
Tssr66683 7 46396881 to 46396894 13 + TSS region transcription start site region 66683
Tssr66684 7 46397103 to 46397112 9 + TSS region transcription start site region 66684
Tssr66685 7 46397162 to 46397201 39 + TSS region transcription start site region 66685
Tssr66686 7 46397291 to 46397320 29 + TSS region transcription start site region 66686
Tssr66687 7 46397327 to 46397339 12 + TSS region transcription start site region 66687
Tssr66688 7 46397344 to 46397421 77 + TSS region transcription start site region 66688
Tssr66689 7 46397761 to 46397783 22 + TSS region transcription start site region 66689
Tssr66690 7 46397801 to 46397820 19 + TSS region transcription start site region 66690
Tssr66691 7 46422656 to 46422684 28 + TSS region transcription start site region 66691
Tssr66692 7 46426755 to 46426757 2 + TSS region transcription start site region 66692
Tssr66693 7 46427629 to 46427644 15 + TSS region transcription start site region 66693
1700121F22Rik 7 46440381 to 46440704 323 unclassified gene RIKEN cDNA 1700121F22 gene
Tssr66694 7 46440816 to 46440824 8 + TSS region transcription start site region 66694
Gm45984 7 46441239 to 46442183 944 + lncRNA gene predicted gene, 45984
Sergef 7 46443159 to 46639807 196648 - protein coding gene secretion regulating guanine nucleotide exchange factor
Gm22969 7 46450413 to 46450519 106 + snRNA gene predicted gene, 22969
Cpgi19123 7 46509895 to 46510077 182 CpG island CpG island 19123
Gm45311 7 46511451 to 46512780 1329 - sense intronic lncRNA gene predicted gene 45311
Gm15700 7 46561301 to 46578201 16900 + antisense lncRNA gene predicted gene 15700
Gm45310 7 46561451 to 46561725 274 - unclassified gene predicted gene 45310
Cpgi19124 7 46639214 to 46640344 1130 CpG island CpG island 19124
Tssr72526 7 46639778 to 46639817 39 - TSS region transcription start site region 72526
D7Ertd526e 7 46640613 to 46640821 208 DNA segment DNA segment, Chr 7, ERATO Doi 526, expressed
Tph1 7 46644641 to 46672537 27896 - protein coding gene tryptophan hydroxylase 1
Tssr72527 7 46667303 to 46667316 13 - TSS region transcription start site region 72527
Tssr72528 7 46667375 to 46667378 3 - TSS region transcription start site region 72528
Cpgi19125 7 46667377 to 46667583 206 CpG island CpG island 19125
Tssr72529 7 46667427 to 46667435 8 - TSS region transcription start site region 72529
Tssr72530 7 46672298 to 46672311 13 - TSS region transcription start site region 72530
Tssr72531 7 46672384 to 46672398 14 - TSS region transcription start site region 72531
Tssr72532 7 46672499 to 46672506 7 - TSS region transcription start site region 72532
Tssr72533 7 46672511 to 46672524 13 - TSS region transcription start site region 72533
Tssr72534 7 46672527 to 46672541 14 - TSS region transcription start site region 72534
Tssr72535 7 46672554 to 46672559 5 - TSS region transcription start site region 72535
Gm45629 7 46682838 to 46685383 2545 - unclassified gene predicted gene 45629
Saal1 7 46686108 to 46710680 24572 - protein coding gene serum amyloid A-like 1
Cpgi19126 7 46710217 to 46710910 693 CpG island CpG island 19126
Tssr72536 7 46710642 to 46710687 45 - TSS region transcription start site region 72536
Tssr66695 7 46711993 to 46712005 12 + TSS region transcription start site region 66695
Saa3 7 46711998 to 46715676 3678 - protein coding gene serum amyloid A 3
Tssr72537 7 46712026 to 46712055 29 - TSS region transcription start site region 72537
Tssr72538 7 46712056 to 46712069 13 - TSS region transcription start site region 72538
Tssr66696 7 46712068 to 46712085 17 + TSS region transcription start site region 66696
Tssr72539 7 46712076 to 46712094 18 - TSS region transcription start site region 72539
Tssr72540 7 46712096 to 46712123 27 - TSS region transcription start site region 72540
Tssr72541 7 46712125 to 46712126 1 - TSS region transcription start site region 72541
Tssr72542 7 46712133 to 46712188 55 - TSS region transcription start site region 72542
Tssr66697 7 46712182 to 46712189 7 + TSS region transcription start site region 66697
Tssr72543 7 46712191 to 46712199 8 - TSS region transcription start site region 72543
Tssr66698 7 46712204 to 46712239 35 + TSS region transcription start site region 66698
Tssr72544 7 46712243 to 46712251 8 - TSS region transcription start site region 72544
Tssr72545 7 46712608 to 46712618 10 - TSS region transcription start site region 72545
Tssr72546 7 46712619 to 46712626 7 - TSS region transcription start site region 72546
Tssr72547 7 46712638 to 46712652 14 - TSS region transcription start site region 72547
Tssr66699 7 46712667 to 46712701 34 + TSS region transcription start site region 66699
Tssr72548 7 46712697 to 46712737 40 - TSS region transcription start site region 72548
Tssr72549 7 46714298 to 46714308 10 - TSS region transcription start site region 72549
Tssr72550 7 46714340 to 46714356 16 - TSS region transcription start site region 72550
Tssr72551 7 46714514 to 46714526 12 - TSS region transcription start site region 72551
Tssr2261 7 46715070 to 46715076 6 - TSS region transcription start site region 2261
Tssr2262 7 46715257 to 46715277 20 - TSS region transcription start site region 2262
Tssr2263 7 46715420 to 46715440 20 - TSS region transcription start site region 2263
Tssr2264 7 46715629 to 46715665 36 - TSS region transcription start site region 2264
Tssr72552 7 46715692 to 46715708 16 - TSS region transcription start site region 72552
Tssr72553 7 46715887 to 46715916 29 - TSS region transcription start site region 72553
Gm31882 7 46718886 to 46721322 2436 + lncRNA gene predicted gene, 31882
Saa4 7 46727998 to 46732543 4545 - protein coding gene serum amyloid A 4
Tssr2265 7 46728564 to 46728605 41 + TSS region transcription start site region 2265
Tssr72554 7 46728598 to 46728628 30 - TSS region transcription start site region 72554
Tssr72555 7 46728688 to 46728716 28 - TSS region transcription start site region 72555
Tssr72556 7 46728746 to 46728765 19 - TSS region transcription start site region 72556
Tssr72557 7 46728796 to 46728805 9 - TSS region transcription start site region 72557
Tssr72558 7 46728822 to 46728831 9 - TSS region transcription start site region 72558
Tssr72559 7 46728871 to 46728894 23 - TSS region transcription start site region 72559
Tssr72560 7 46728983 to 46728990 7 - TSS region transcription start site region 72560
Tssr72561 7 46729162 to 46729169 7 - TSS region transcription start site region 72561
Tssr72562 7 46732562 to 46732571 9 - TSS region transcription start site region 72562
Tssr72563 7 46732581 to 46732611 30 - TSS region transcription start site region 72563
Saa-ps 7 46734688 to 46735583 895 - pseudogene serum amyloid A, pseudogene