Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45747299-45919784

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sult2b1 7 45721169 to 45759555 38386 - protein coding gene sulfotransferase family, cytosolic, 2B, member 1
Gm31597 7 45742049 to 45750257 8208 + antisense lncRNA gene predicted gene, 31597
Cpgi19086 7 45759341 to 45759726 385 CpG island CpG island 19086
Tssr72470 7 45759497 to 45759511 14 - TSS region transcription start site region 72470
Tssr72471 7 45759527 to 45759538 11 - TSS region transcription start site region 72471
Gm39009 7 45765353 to 45775793 10440 + lncRNA gene predicted gene, 39009
Cpgi19087 7 45779128 to 45779454 326 CpG island CpG island 19087
Cpgi19088 7 45783495 to 45784169 674 CpG island CpG island 19088
Tssr66636 7 45783686 to 45783732 46 + TSS region transcription start site region 66636
Lmtk3 7 45783738 to 45804144 20406 + protein coding gene lemur tyrosine kinase 3
Tssr66637 7 45783883 to 45783944 61 + TSS region transcription start site region 66637
Tssr72472 7 45785026 to 45785031 5 - TSS region transcription start site region 72472
Tssr66638 7 45785331 to 45785390 59 + TSS region transcription start site region 66638
Cpgi19089 7 45785383 to 45785952 569 CpG island CpG island 19089
Tssr66639 7 45785570 to 45785607 37 + TSS region transcription start site region 66639
Cpgi19090 7 45786478 to 45786765 287 CpG island CpG island 19090
Tssr66640 7 45787388 to 45787428 40 + TSS region transcription start site region 66640
Cpgi19091 7 45787618 to 45788019 401 CpG island CpG island 19091
Cpgi19092 7 45792032 to 45792635 603 CpG island CpG island 19092
Cpgi19093 7 45793378 to 45794515 1137 CpG island CpG island 19093
Cpgi19094 7 45794930 to 45795516 586 CpG island CpG island 19094
Cpgi19095 7 45797671 to 45798839 1168 CpG island CpG island 19095
Tssr66641 7 45800684 to 45800728 44 + TSS region transcription start site region 66641
Cyth2 7 45806637 to 45814344 7707 - protein coding gene cytohesin 2
Tssr72473 7 45808225 to 45808231 6 - TSS region transcription start site region 72473
Tssr72474 7 45812913 to 45812916 3 - TSS region transcription start site region 72474
Cpgi19096 7 45813541 to 45814636 1095 CpG island CpG island 19096
Tssr66642 7 45813988 to 45814000 12 + TSS region transcription start site region 66642
Gm45444 7 45814022 to 45814919 897 + unclassified gene predicted gene 45444
Tssr66643 7 45814025 to 45814036 11 + TSS region transcription start site region 66643
Tssr72475 7 45814248 to 45814276 28 - TSS region transcription start site region 72475
Tssr72476 7 45814277 to 45814300 23 - TSS region transcription start site region 72476
Tssr72477 7 45814302 to 45814321 19 - TSS region transcription start site region 72477
Kcnj14 7 45816447 to 45824747 8300 - protein coding gene potassium inwardly-rectifying channel, subfamily J, member 14
Cpgi19097 7 45819589 to 45820015 426 CpG island CpG island 19097
Tssr72478 7 45824705 to 45824712 7 - TSS region transcription start site region 72478
Tssr72479 7 45824715 to 45824740 25 - TSS region transcription start site region 72479
Tssr72480 7 45824750 to 45824761 11 - TSS region transcription start site region 72480
Grwd1 7 45825223 to 45830944 5721 - protein coding gene glutamate-rich WD repeat containing 1
Cpgi19098 7 45830297 to 45830955 658 CpG island CpG island 19098
Tssr72481 7 45830776 to 45830816 40 - TSS region transcription start site region 72481
Tssr66644 7 45830858 to 45830881 23 + TSS region transcription start site region 66644
Tssr66645 7 45830889 to 45830901 12 + TSS region transcription start site region 66645
Gm45441 7 45830895 to 45835249 4354 + antisense lncRNA gene predicted gene 45441
Grin2d 7 45831883 to 45871318 39435 - protein coding gene glutamate receptor, ionotropic, NMDA2D (epsilon 4)
Cpgi19099 7 45832299 to 45834784 2485 CpG island CpG island 19099
Tssr66646 7 45833305 to 45833320 15 + TSS region transcription start site region 66646
Tssr66647 7 45833322 to 45833333 11 + TSS region transcription start site region 66647
Tssr66648 7 45833594 to 45833619 25 + TSS region transcription start site region 66648
Tssr66649 7 45833620 to 45833638 18 + TSS region transcription start site region 66649
Cpgi19100 7 45856696 to 45856964 268 CpG island CpG island 19100
Cpgi19101 7 45857381 to 45858037 656 CpG island CpG island 19101
Cpgi19102 7 45861953 to 45862430 477 CpG island CpG island 19102
Cpgi19103 7 45865658 to 45867165 1507 CpG island CpG island 19103
Tssr66650 7 45866207 to 45866279 72 + TSS region transcription start site region 66650
Tssr72482 7 45867480 to 45867493 13 - TSS region transcription start site region 72482
Cpgi19104 7 45869758 to 45870057 299 CpG island CpG island 19104
Tssr72483 7 45870227 to 45870238 11 - TSS region transcription start site region 72483
Tssr66651 7 45870456 to 45870473 17 + TSS region transcription start site region 66651
Cpgi19105 7 45870466 to 45871098 632 CpG island CpG island 19105
Tssr72484 7 45870964 to 45870986 22 - TSS region transcription start site region 72484
Cpgi19106 7 45872710 to 45873177 467 CpG island CpG island 19106
Tssr66652 7 45872801 to 45872857 56 + TSS region transcription start site region 66652
Kdelr1 7 45872840 to 45883726 10886 + protein coding gene KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
Tssr66653 7 45872862 to 45872882 20 + TSS region transcription start site region 66653
Tssr66654 7 45873167 to 45873187 20 + TSS region transcription start site region 66654
Gm22098 7 45875547 to 45875631 84 - snRNA gene predicted gene, 22098
Tssr66655 7 45883337 to 45883360 23 + TSS region transcription start site region 66655
Syngr4 7 45885222 to 45896714 11492 - protein coding gene synaptogyrin 4
Cpgi19107 7 45896552 to 45897121 569 CpG island CpG island 19107
Tssr72485 7 45896656 to 45896674 18 - TSS region transcription start site region 72485
Tssr72486 7 45896677 to 45896692 15 - TSS region transcription start site region 72486
Tmem143 7 45896990 to 45917418 20428 + protein coding gene transmembrane protein 143
Tssr66656 7 45897046 to 45897089 43 + TSS region transcription start site region 66656
Tssr66657 7 45897400 to 45897434 34 + TSS region transcription start site region 66657
Tssr66658 7 45897469 to 45897534 65 + TSS region transcription start site region 66658
Cpgi19108 7 45897590 to 45897741 151 CpG island CpG island 19108
Tssr66659 7 45916155 to 45916185 30 + TSS region transcription start site region 66659
Tssr72487 7 45916733 to 45916758 25 - TSS region transcription start site region 72487
Tssr72488 7 45916772 to 45916795 23 - TSS region transcription start site region 72488
Tssr2256 7 45917566 to 45917576 10 + TSS region transcription start site region 2256
Emp3 7 45918023 to 45921404 3381 - protein coding gene epithelial membrane protein 3
Tssr66660 7 45918027 to 45918053 26 + TSS region transcription start site region 66660
Tssr72489 7 45919346 to 45919359 13 - TSS region transcription start site region 72489