Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45709527-45809538

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dbp 7 45705093 to 45710203 5110 + protein coding gene D site albumin promoter binding protein
Sphk2 7 45709467 to 45718002 8535 - protein coding gene sphingosine kinase 2
Tssr72445 7 45711444 to 45711487 43 - TSS region transcription start site region 72445
Tssr72446 7 45711537 to 45711566 29 - TSS region transcription start site region 72446
Tssr72447 7 45712307 to 45712323 16 - TSS region transcription start site region 72447
Tssr72448 7 45712452 to 45712469 17 - TSS region transcription start site region 72448
Tssr72449 7 45713563 to 45713589 26 - TSS region transcription start site region 72449
Tssr72450 7 45714667 to 45714678 11 - TSS region transcription start site region 72450
Tssr72451 7 45714680 to 45714696 16 - TSS region transcription start site region 72451
Tssr72452 7 45714698 to 45714729 31 - TSS region transcription start site region 72452
Tssr2253 7 45714878 to 45714890 12 + TSS region transcription start site region 2253
Cpgi19083 7 45714970 to 45715522 552 CpG island CpG island 19083
Tssr72453 7 45715180 to 45715212 32 - TSS region transcription start site region 72453
Tssr2254 7 45715398 to 45715420 22 + TSS region transcription start site region 2254
Tssr66626 7 45715513 to 45715534 21 + TSS region transcription start site region 66626
Tssr72454 7 45717031 to 45717034 3 - TSS region transcription start site region 72454
Tssr72455 7 45717038 to 45717045 7 - TSS region transcription start site region 72455
Tssr72456 7 45717067 to 45717093 26 - TSS region transcription start site region 72456
Tssr72457 7 45717341 to 45717353 12 - TSS region transcription start site region 72457
Tssr72458 7 45717619 to 45717676 57 - TSS region transcription start site region 72458
Cpgi19084 7 45717635 to 45718673 1038 CpG island CpG island 19084
Tssr72459 7 45717890 to 45717918 28 - TSS region transcription start site region 72459
Tssr72460 7 45717919 to 45717950 31 - TSS region transcription start site region 72460
Tssr72461 7 45717958 to 45717974 16 - TSS region transcription start site region 72461
Tssr66627 7 45718018 to 45718024 6 + TSS region transcription start site region 66627
Tssr66628 7 45718035 to 45718048 13 + TSS region transcription start site region 66628
Tssr66629 7 45718058 to 45718111 53 + TSS region transcription start site region 66629
Rpl18 7 45718071 to 45720835 2764 + protein coding gene ribosomal protein L18
Tssr66630 7 45718121 to 45718147 26 + TSS region transcription start site region 66630
Sult2b1 7 45721169 to 45759555 38386 - protein coding gene sulfotransferase family, cytosolic, 2B, member 1
Tssr66631 7 45721183 to 45721233 50 + TSS region transcription start site region 66631
Fam83e 7 45721212 to 45729492 8280 + protein coding gene family with sequence similarity 83, member E
Tssr66632 7 45721236 to 45721244 8 + TSS region transcription start site region 66632
Spaca4 7 45725107 to 45725813 706 - protein coding gene sperm acrosome associated 4
Tssr72462 7 45725751 to 45725766 15 - TSS region transcription start site region 72462
Tssr72463 7 45725767 to 45725777 10 - TSS region transcription start site region 72463
Tssr72464 7 45725787 to 45725813 26 - TSS region transcription start site region 72464
Tssr66633 7 45725856 to 45725879 23 + TSS region transcription start site region 66633
Tssr72465 7 45731577 to 45731593 16 - TSS region transcription start site region 72465
Tssr2255 7 45731946 to 45731950 4 - TSS region transcription start site region 2255
Tssr66634 7 45742030 to 45742051 21 + TSS region transcription start site region 66634
Gm31597 7 45742049 to 45750257 8208 + antisense lncRNA gene predicted gene, 31597
Tssr72466 7 45742281 to 45742317 36 - TSS region transcription start site region 72466
Tssr72467 7 45742324 to 45742341 17 - TSS region transcription start site region 72467
Tssr72468 7 45742346 to 45742367 21 - TSS region transcription start site region 72468
Cpgi19085 7 45742413 to 45742753 340 CpG island CpG island 19085
Tssr72469 7 45742455 to 45742468 13 - TSS region transcription start site region 72469
Tssr66635 7 45742813 to 45742844 31 + TSS region transcription start site region 66635
Cpgi19086 7 45759341 to 45759726 385 CpG island CpG island 19086
Tssr72470 7 45759497 to 45759511 14 - TSS region transcription start site region 72470
Tssr72471 7 45759527 to 45759538 11 - TSS region transcription start site region 72471
Gm39009 7 45765353 to 45775793 10440 + lncRNA gene predicted gene, 39009
Cpgi19087 7 45779128 to 45779454 326 CpG island CpG island 19087
Cpgi19088 7 45783495 to 45784169 674 CpG island CpG island 19088
Tssr66636 7 45783686 to 45783732 46 + TSS region transcription start site region 66636
Lmtk3 7 45783738 to 45804144 20406 + protein coding gene lemur tyrosine kinase 3
Tssr66637 7 45783883 to 45783944 61 + TSS region transcription start site region 66637
Tssr72472 7 45785026 to 45785031 5 - TSS region transcription start site region 72472
Tssr66638 7 45785331 to 45785390 59 + TSS region transcription start site region 66638
Cpgi19089 7 45785383 to 45785952 569 CpG island CpG island 19089
Tssr66639 7 45785570 to 45785607 37 + TSS region transcription start site region 66639
Cpgi19090 7 45786478 to 45786765 287 CpG island CpG island 19090
Tssr66640 7 45787388 to 45787428 40 + TSS region transcription start site region 66640
Cpgi19091 7 45787618 to 45788019 401 CpG island CpG island 19091
Cpgi19092 7 45792032 to 45792635 603 CpG island CpG island 19092
Cpgi19093 7 45793378 to 45794515 1137 CpG island CpG island 19093
Cpgi19094 7 45794930 to 45795516 586 CpG island CpG island 19094
Cpgi19095 7 45797671 to 45798839 1168 CpG island CpG island 19095
Tssr66641 7 45800684 to 45800728 44 + TSS region transcription start site region 66641
Cyth2 7 45806637 to 45814344 7707 - protein coding gene cytohesin 2
Tssr72473 7 45808225 to 45808231 6 - TSS region transcription start site region 72473