Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45567140-45629569

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsd17b14 7 45554856 to 45567321 12465 + protein coding gene hydroxysteroid (17-beta) dehydrogenase 14
Tssr66584 7 45567159 to 45567191 32 + TSS region transcription start site region 66584
0610005C13Rik 7 45567795 to 45575176 7381 - antisense lncRNA gene RIKEN cDNA 0610005C13 gene
Cpgi19068 7 45568197 to 45568490 293 CpG island CpG island 19068
Cpgi19069 7 45570037 to 45570682 645 CpG island CpG island 19069
Bcat2 7 45570153 to 45589711 19558 + protein coding gene branched chain aminotransferase 2, mitochondrial
Tssr66585 7 45570320 to 45570334 14 + TSS region transcription start site region 66585
Tssr66586 7 45570342 to 45570371 29 + TSS region transcription start site region 66586
Tssr66587 7 45570494 to 45570519 25 + TSS region transcription start site region 66587
Tssr72432 7 45571071 to 45571078 7 - TSS region transcription start site region 72432
Tssr72433 7 45575147 to 45575168 21 - TSS region transcription start site region 72433
Tssr72434 7 45575182 to 45575190 8 - TSS region transcription start site region 72434
Tssr66588 7 45575241 to 45575306 65 + TSS region transcription start site region 66588
Tssr66589 7 45587943 to 45587950 7 + TSS region transcription start site region 66589
Cpgi19070 7 45589162 to 45589574 412 CpG island CpG island 19070
Gm31479 7 45597140 to 45599569 2429 + lincRNA gene predicted gene, 31479
Fgf21 7 45613886 to 45615490 1604 - protein coding gene fibroblast growth factor 21
Tssr72435 7 45615484 to 45615490 6 - TSS region transcription start site region 72435
Cpgi19071 7 45617127 to 45617682 555 CpG island CpG island 19071
Fut1 7 45617289 to 45621059 3770 + protein coding gene fucosyltransferase 1
Tssr66590 7 45617575 to 45617611 36 + TSS region transcription start site region 66590
Tssr66591 7 45620808 to 45620837 29 + TSS region transcription start site region 66591
Tssr66592 7 45621783 to 45621796 13 + TSS region transcription start site region 66592
Tssr66593 7 45621805 to 45621825 20 + TSS region transcription start site region 66593
Izumo1 7 45621811 to 45627242 5431 + protein coding gene izumo sperm-egg fusion 1
Tssr66594 7 45621827 to 45621841 14 + TSS region transcription start site region 66594
Tssr66595 7 45627482 to 45627493 11 + TSS region transcription start site region 66595
Tssr66596 7 45627502 to 45627532 30 + TSS region transcription start site region 66596
Rasip1 7 45627537 to 45639092 11555 + protein coding gene Ras interacting protein 1
Tssr66597 7 45627905 to 45627910 5 + TSS region transcription start site region 66597
Cpgi19072 7 45628078 to 45629500 1422 CpG island CpG island 19072
Tssr66598 7 45628967 to 45628980 13 + TSS region transcription start site region 66598