Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45465400-45555413

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bax 7 45461697 to 45466898 5201 - protein coding gene BCL2-associated X protein
Gm45808 7 45465984 to 45486811 20827 - protein coding gene predicted gene 45808
Tssr72402 7 45466272 to 45466298 26 - TSS region transcription start site region 72402
Cpgi19062 7 45466308 to 45467083 775 CpG island CpG island 19062
Tssr72403 7 45466378 to 45466428 50 - TSS region transcription start site region 72403
Tssr72404 7 45466471 to 45466487 16 - TSS region transcription start site region 72404
Tssr72405 7 45466512 to 45466542 30 - TSS region transcription start site region 72405
Tssr72406 7 45466550 to 45466587 37 - TSS region transcription start site region 72406
Tssr72407 7 45466779 to 45466790 11 - TSS region transcription start site region 72407
Tssr72408 7 45466793 to 45466854 61 - TSS region transcription start site region 72408
Tssr72409 7 45466872 to 45466883 11 - TSS region transcription start site region 72409
Tssr72410 7 45466894 to 45466901 7 - TSS region transcription start site region 72410
Dhdh 7 45473563 to 45488872 15309 - protein coding gene dihydrodiol dehydrogenase (dimeric)
Tssr72411 7 45474276 to 45474299 23 - TSS region transcription start site region 72411
Tssr72412 7 45474461 to 45474467 6 - TSS region transcription start site region 72412
Tssr72413 7 45474651 to 45474682 31 - TSS region transcription start site region 72413
Tssr72414 7 45474793 to 45474814 21 - TSS region transcription start site region 72414
Tssr72415 7 45474935 to 45474961 26 - TSS region transcription start site region 72415
Tssr72416 7 45475003 to 45475016 13 - TSS region transcription start site region 72416
Tssr72417 7 45475059 to 45475075 16 - TSS region transcription start site region 72417
Tssr66543 7 45481752 to 45481766 14 + TSS region transcription start site region 66543
Tulp2 7 45482026 to 45523632 41606 + protein coding gene tubby-like protein 2
Tssr72418 7 45484496 to 45484523 27 - TSS region transcription start site region 72418
Tssr66544 7 45486259 to 45486274 15 + TSS region transcription start site region 66544
Tssr66545 7 45486279 to 45486316 37 + TSS region transcription start site region 66545
Tssr66546 7 45486338 to 45486339 1 + TSS region transcription start site region 66546
Tssr66547 7 45486360 to 45486399 39 + TSS region transcription start site region 66547
Cpgi19063 7 45488576 to 45489046 470 CpG island CpG island 19063
Tssr72419 7 45488774 to 45488802 28 - TSS region transcription start site region 72419
Tssr72420 7 45488835 to 45488860 25 - TSS region transcription start site region 72420
Nucb1 7 45492674 to 45510408 17734 - protein coding gene nucleobindin 1
Tssr72421 7 45493574 to 45493604 30 - TSS region transcription start site region 72421
Tssr72422 7 45493714 to 45493726 12 - TSS region transcription start site region 72422
Cpgi19064 7 45509670 to 45510569 899 CpG island CpG island 19064
Tssr72423 7 45510351 to 45510360 9 - TSS region transcription start site region 72423
Tssr72424 7 45510366 to 45510399 33 - TSS region transcription start site region 72424
Tssr72425 7 45510400 to 45510413 13 - TSS region transcription start site region 72425
Gm45478 7 45512357 to 45512567 210 - pseudogene predicted gene 45478
D7Mit81 7 45512542 to 45512686 144 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 81
Tssr66548 7 45513701 to 45513710 9 + TSS region transcription start site region 66548
Tssr66549 7 45513718 to 45513747 29 + TSS region transcription start site region 66549
Tssr66550 7 45514596 to 45514614 18 + TSS region transcription start site region 66550
Tssr66551 7 45514619 to 45514642 23 + TSS region transcription start site region 66551
Tssr66552 7 45518239 to 45518263 24 + TSS region transcription start site region 66552
Cpgi19065 7 45521782 to 45522311 529 CpG island CpG island 19065
Tssr72426 7 45522027 to 45522063 36 - TSS region transcription start site region 72426
Ppp1r15a 7 45522917 to 45526268 3351 - protein coding gene protein phosphatase 1, regulatory subunit 15A
Tssr72427 7 45523915 to 45523973 58 - TSS region transcription start site region 72427
Tssr72428 7 45524811 to 45524873 62 - TSS region transcription start site region 72428
Tssr72429 7 45525379 to 45525399 20 - TSS region transcription start site region 72429
Tssr66553 7 45525513 to 45525549 36 + TSS region transcription start site region 66553
Cpgi19066 7 45525859 to 45526596 737 CpG island CpG island 19066
Tssr72430 7 45526213 to 45526234 21 - TSS region transcription start site region 72430
Plekha4 7 45526330 to 45554229 27899 + protein coding gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
Tssr66554 7 45526430 to 45526447 17 + TSS region transcription start site region 66554
Tssr66555 7 45526531 to 45526534 3 + TSS region transcription start site region 66555
Tssr66556 7 45529592 to 45529640 48 + TSS region transcription start site region 66556
Cpgi19067 7 45538117 to 45538495 378 CpG island CpG island 19067
Tssr72431 7 45538477 to 45538503 26 - TSS region transcription start site region 72431
Tssr66557 7 45540864 to 45540880 16 + TSS region transcription start site region 66557
Tssr66558 7 45549846 to 45549872 26 + TSS region transcription start site region 66558
Tssr66559 7 45549873 to 45549899 26 + TSS region transcription start site region 66559
Gm45564 7 45550534 to 45551615 1081 - antisense lncRNA gene predicted gene 45564
Tssr66560 7 45554831 to 45554836 5 + TSS region transcription start site region 66560
Hsd17b14 7 45554856 to 45567321 12465 + protein coding gene hydroxysteroid (17-beta) dehydrogenase 14
Tssr66561 7 45554915 to 45554922 7 + TSS region transcription start site region 66561
Tssr66562 7 45554926 to 45554937 11 + TSS region transcription start site region 66562
Tssr66563 7 45554948 to 45554961 13 + TSS region transcription start site region 66563
Tssr66564 7 45554992 to 45555007 15 + TSS region transcription start site region 66564
Bw1n 7 119094307 to 45512542 -73581765 QTL body weight 1 in NSY