Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45356759-45416763

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppfia3 7 45339126 to 45367019 27893 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Cpgi19048 7 45361309 to 45362130 821 CpG island CpG island 19048
Tssr66519 7 45361565 to 45361579 14 + TSS region transcription start site region 66519
Cpgi19049 7 45366043 to 45367872 1829 CpG island CpG island 19049
Mtag2 7 45366163 to 45367948 1785 + antisense lncRNA gene metastasis associated gene 2
Tssr72376 7 45366768 to 45366840 72 - TSS region transcription start site region 72376
Lin7b 7 45367891 to 45370564 2673 - protein coding gene lin-7 homolog B (C. elegans)
Gm45619 7 45368177 to 45368704 527 + lincRNA gene predicted gene 45619
Cpgi19050 7 45369845 to 45370842 997 CpG island CpG island 19050
Tssr72377 7 45370559 to 45370617 58 - TSS region transcription start site region 72377
Snrnp70 7 45376454 to 45395742 19288 - protein coding gene small nuclear ribonucleoprotein 70 (U1)
Tssr66520 7 45377170 to 45377197 27 + TSS region transcription start site region 66520
Tssr72378 7 45385798 to 45385802 4 - TSS region transcription start site region 72378
Tssr72379 7 45386759 to 45386763 4 - TSS region transcription start site region 72379
Gm22478 7 45388531 to 45388684 153 + snoRNA gene predicted gene, 22478
Tssr72380 7 45395182 to 45395203 21 - TSS region transcription start site region 72380
Tssr72381 7 45395215 to 45395229 14 - TSS region transcription start site region 72381
Cpgi19051 7 45395299 to 45396121 822 CpG island CpG island 19051
Tssr72382 7 45395672 to 45395719 47 - TSS region transcription start site region 72382
Cpgi19052 7 45405219 to 45405410 191 CpG island CpG island 19052
Kcna7 7 45405653 to 45409763 4110 + protein coding gene potassium voltage-gated channel, shaker-related subfamily, member 7
Cpgi19053 7 45405956 to 45407420 1464 CpG island CpG island 19053
Tssr66521 7 45406415 to 45406463 48 + TSS region transcription start site region 66521
Tssr72383 7 45406970 to 45406984 14 - TSS region transcription start site region 72383
Tssr72384 7 45406998 to 45407014 16 - TSS region transcription start site region 72384
Cpgi19054 7 45413319 to 45414495 1176 CpG island CpG island 19054
Tssr66522 7 45413657 to 45413705 48 + TSS region transcription start site region 66522
Ntf5 7 45413695 to 45417179 3484 + protein coding gene neurotrophin 5
Cpgi19055 7 45415615 to 45416106 491 CpG island CpG island 19055