Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:45335559-45405617

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hrc 7 45335290 to 45338974 3684 + protein coding gene histidine rich calcium binding protein
Tssr66515 7 45336029 to 45336049 20 + TSS region transcription start site region 66515
Tssr66516 7 45336150 to 45336184 34 + TSS region transcription start site region 66516
Tssr72370 7 45336246 to 45336255 9 - TSS region transcription start site region 72370
Tssr72371 7 45336440 to 45336468 28 - TSS region transcription start site region 72371
Tssr72372 7 45336478 to 45336511 33 - TSS region transcription start site region 72372
Tssr72373 7 45336547 to 45336562 15 - TSS region transcription start site region 72373
Tssr66517 7 45336903 to 45336943 40 + TSS region transcription start site region 66517
Ppfia3 7 45339126 to 45367019 27893 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Cpgi19045 7 45339266 to 45340242 976 CpG island CpG island 19045
Tssr66518 7 45339977 to 45339988 11 + TSS region transcription start site region 66518
Tssr72374 7 45340711 to 45340742 31 - TSS region transcription start site region 72374
Tssr72375 7 45340750 to 45340777 27 - TSS region transcription start site region 72375
Cpgi19046 7 45340902 to 45341231 329 CpG island CpG island 19046
Cpgi19047 7 45346661 to 45347065 404 CpG island CpG island 19047
Cpgi19048 7 45361309 to 45362130 821 CpG island CpG island 19048
Tssr66519 7 45361565 to 45361579 14 + TSS region transcription start site region 66519
Cpgi19049 7 45366043 to 45367872 1829 CpG island CpG island 19049
Mtag2 7 45366163 to 45367948 1785 + antisense lncRNA gene metastasis associated gene 2
Tssr72376 7 45366768 to 45366840 72 - TSS region transcription start site region 72376
Lin7b 7 45367891 to 45370564 2673 - protein coding gene lin-7 homolog B (C. elegans)
Gm45619 7 45368177 to 45368704 527 + lincRNA gene predicted gene 45619
Cpgi19050 7 45369845 to 45370842 997 CpG island CpG island 19050
Tssr72377 7 45370559 to 45370617 58 - TSS region transcription start site region 72377
Snrnp70 7 45376454 to 45395742 19288 - protein coding gene small nuclear ribonucleoprotein 70 (U1)
Tssr66520 7 45377170 to 45377197 27 + TSS region transcription start site region 66520
Tssr72378 7 45385798 to 45385802 4 - TSS region transcription start site region 72378
Tssr72379 7 45386759 to 45386763 4 - TSS region transcription start site region 72379
Gm22478 7 45388531 to 45388684 153 + snoRNA gene predicted gene, 22478
Tssr72380 7 45395182 to 45395203 21 - TSS region transcription start site region 72380
Tssr72381 7 45395215 to 45395229 14 - TSS region transcription start site region 72381
Cpgi19051 7 45395299 to 45396121 822 CpG island CpG island 19051
Tssr72382 7 45395672 to 45395719 47 - TSS region transcription start site region 72382
Cpgi19052 7 45405219 to 45405410 191 CpG island CpG island 19052