MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:45334266-45345242

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr72369	7	45334523 to 45334567	44	-	TSS region	transcription start site region 72369
Tssr66513	7	45335256 to 45335297	41	+	TSS region	transcription start site region 66513
Hrc	7	45335290 to 45338974	3684	+	protein coding gene	histidine rich calcium binding protein
Tssr66514	7	45335299 to 45335310	11	+	TSS region	transcription start site region 66514
Tssr66515	7	45336029 to 45336049	20	+	TSS region	transcription start site region 66515
Tssr66516	7	45336150 to 45336184	34	+	TSS region	transcription start site region 66516
Tssr72370	7	45336246 to 45336255	9	-	TSS region	transcription start site region 72370
Tssr72371	7	45336440 to 45336468	28	-	TSS region	transcription start site region 72371
Tssr72372	7	45336478 to 45336511	33	-	TSS region	transcription start site region 72372
Tssr72373	7	45336547 to 45336562	15	-	TSS region	transcription start site region 72373
Tssr66517	7	45336903 to 45336943	40	+	TSS region	transcription start site region 66517
Ppfia3	7	45339126 to 45367019	27893	-	protein coding gene	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Cpgi19045	7	45339266 to 45340242	976		CpG island	CpG island 19045
Tssr66518	7	45339977 to 45339988	11	+	TSS region	transcription start site region 66518
Tssr72374	7	45340711 to 45340742	31	-	TSS region	transcription start site region 72374
Tssr72375	7	45340750 to 45340777	27	-	TSS region	transcription start site region 72375
Cpgi19046	7	45340902 to 45341231	329		CpG island	CpG island 19046