Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:4520687-4620691

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnni3 7 4518305 to 4522718 4413 - protein coding gene troponin I, cardiac 3
Cpgi18237 7 4521527 to 4521920 393 CpG island CpG island 18237
Tssr64336 7 4521670 to 4521676 6 + TSS region transcription start site region 64336
Tssr64337 7 4521813 to 4521845 32 + TSS region transcription start site region 64337
Tssr70484 7 4521876 to 4521903 27 - TSS region transcription start site region 70484
Tssr70485 7 4522427 to 4522449 22 - TSS region transcription start site region 70485
Tssr70486 7 4522799 to 4522812 13 - TSS region transcription start site region 70486
Tssr70487 7 4522816 to 4522829 13 - TSS region transcription start site region 70487
Dnaaf3 7 4522933 to 4532453 9520 - protein coding gene dynein, axonemal assembly factor 3
Tssr70488 7 4524337 to 4524355 18 - TSS region transcription start site region 70488
Tssr70489 7 4526448 to 4526516 68 - TSS region transcription start site region 70489
Cpgi18238 7 4526505 to 4527135 630 CpG island CpG island 18238
Gm15873 7 4526536 to 4530575 4039 + antisense lncRNA gene predicted gene 15873
Tssr64338 7 4526548 to 4526563 15 + TSS region transcription start site region 64338
Tssr64339 7 4526592 to 4526606 14 + TSS region transcription start site region 64339
Cpgi18239 7 4527394 to 4527638 244 CpG island CpG island 18239
Tssr70490 7 4528096 to 4528139 43 - TSS region transcription start site region 70490
Tssr70491 7 4528149 to 4528161 12 - TSS region transcription start site region 70491
Cpgi18240 7 4532175 to 4532541 366 CpG island CpG island 18240
Tssr70492 7 4532419 to 4532470 51 - TSS region transcription start site region 70492
Syt5 7 4539765 to 4547541 7776 - protein coding gene synaptotagmin V
Cpgi18241 7 4546124 to 4546323 199 CpG island CpG island 18241
Cpgi18242 7 4546584 to 4547672 1088 CpG island CpG island 18242
Tssr70493 7 4547331 to 4547396 65 - TSS region transcription start site region 70493
Tssr70494 7 4547416 to 4547425 9 - TSS region transcription start site region 70494
Tssr70495 7 4547442 to 4547451 9 - TSS region transcription start site region 70495
Tssr70496 7 4547460 to 4547506 46 - TSS region transcription start site region 70496
Tssr70497 7 4547509 to 4547520 11 - TSS region transcription start site region 70497
Tssr70498 7 4547524 to 4547535 11 - TSS region transcription start site region 70498
Ptprh 7 4548614 to 4604041 55427 - protein coding gene protein tyrosine phosphatase, receptor type, H
D7Mit1003 7 4566239 to 4566349 110 DNA segment DNA Segment, Chr 7 Massachusetts Institute of Technology 1003
Tssr70499 7 4570687 to 4570691 4 - TSS region transcription start site region 70499
Gm23577 7 4580069 to 4580178 109 - miRNA gene predicted gene, 23577
Tssr70500 7 4603105 to 4603160 55 - TSS region transcription start site region 70500
Tssr70501 7 4604042 to 4604053 11 - TSS region transcription start site region 70501
Gm9463 7 4611635 to 4612235 600 + pseudogene predicted gene 9463
Gm18973 7 4612414 to 4613167 753 - pseudogene predicted gene, 18973