Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 7:44973528-45173530

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153 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trpm4 7 44952579 to 44983495 30916 - protein coding gene transient receptor potential cation channel, subfamily M, member 4
Tssr66510 7 44974364 to 44974367 3 + TSS region transcription start site region 66510
Rpl14-ps1 7 44974389 to 44975041 652 + pseudogene ribosomal protein L14, pseudogene 1
Tssr66511 7 44974453 to 44974490 37 + TSS region transcription start site region 66511
Tssr66512 7 44974660 to 44974682 22 + TSS region transcription start site region 66512
Tssr72366 7 44974747 to 44974767 20 - TSS region transcription start site region 72366
Cpgi19043 7 44976708 to 44977136 428 CpG island CpG island 19043
Cpgi19044 7 44982592 to 44983418 826 CpG island CpG island 19044
Tssr72367 7 44983157 to 44983175 18 - TSS region transcription start site region 72367
Tssr72368 7 44983178 to 44983224 46 - TSS region transcription start site region 72368
Tssr72369 7 44983947 to 44983991 44 - TSS region transcription start site region 72369
Tssr66513 7 44984680 to 44984721 41 + TSS region transcription start site region 66513
Hrc 7 44984714 to 44988398 3684 + protein coding gene histidine rich calcium binding protein
Tssr66514 7 44984723 to 44984734 11 + TSS region transcription start site region 66514
Tssr66515 7 44985453 to 44985473 20 + TSS region transcription start site region 66515
Tssr66516 7 44985574 to 44985608 34 + TSS region transcription start site region 66516
Tssr72370 7 44985670 to 44985679 9 - TSS region transcription start site region 72370
Tssr72371 7 44985864 to 44985892 28 - TSS region transcription start site region 72371
Tssr72372 7 44985902 to 44985935 33 - TSS region transcription start site region 72372
Tssr72373 7 44985971 to 44985986 15 - TSS region transcription start site region 72373
Tssr66517 7 44986327 to 44986367 40 + TSS region transcription start site region 66517
Ppfia3 7 44988550 to 45016443 27893 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Cpgi19045 7 44988690 to 44989666 976 CpG island CpG island 19045
Tssr66518 7 44989401 to 44989412 11 + TSS region transcription start site region 66518
Tssr72374 7 44990135 to 44990166 31 - TSS region transcription start site region 72374
Tssr72375 7 44990174 to 44990201 27 - TSS region transcription start site region 72375
Cpgi19046 7 44990326 to 44990655 329 CpG island CpG island 19046
Cpgi19047 7 44996085 to 44996489 404 CpG island CpG island 19047
Cpgi19048 7 45010733 to 45011554 821 CpG island CpG island 19048
Tssr66519 7 45010989 to 45011003 14 + TSS region transcription start site region 66519
Cpgi19049 7 45015467 to 45017296 1829 CpG island CpG island 19049
Mtag2 7 45015587 to 45017372 1785 + lncRNA gene metastasis associated gene 2
Tssr72376 7 45016192 to 45016264 72 - TSS region transcription start site region 72376
Lin7b 7 45017315 to 45019988 2673 - protein coding gene lin-7 homolog B, crumbs cell polarity complex component
Gm45619 7 45017601 to 45018128 527 + lncRNA gene predicted gene 45619
Cpgi19050 7 45019269 to 45020266 997 CpG island CpG island 19050
Tssr72377 7 45019983 to 45020041 58 - TSS region transcription start site region 72377
Snrnp70 7 45025877 to 45045166 19289 - protein coding gene small nuclear ribonucleoprotein 70 (U1)
Tssr66520 7 45026594 to 45026621 27 + TSS region transcription start site region 66520
Tssr72378 7 45035222 to 45035226 4 - TSS region transcription start site region 72378
Tssr72379 7 45036183 to 45036187 4 - TSS region transcription start site region 72379
Tssr72380 7 45044606 to 45044627 21 - TSS region transcription start site region 72380
Tssr72381 7 45044639 to 45044653 14 - TSS region transcription start site region 72381
Cpgi19051 7 45044723 to 45045545 822 CpG island CpG island 19051
Tssr72382 7 45045096 to 45045143 47 - TSS region transcription start site region 72382
Cpgi19052 7 45054643 to 45054834 191 CpG island CpG island 19052
Kcna7 7 45055077 to 45059187 4110 + protein coding gene potassium voltage-gated channel, shaker-related subfamily, member 7
Cpgi19053 7 45055380 to 45056844 1464 CpG island CpG island 19053
Tssr66521 7 45055839 to 45055887 48 + TSS region transcription start site region 66521
Tssr72383 7 45056394 to 45056408 14 - TSS region transcription start site region 72383
Tssr72384 7 45056422 to 45056438 16 - TSS region transcription start site region 72384
Cpgi19054 7 45062743 to 45063919 1176 CpG island CpG island 19054
Tssr66522 7 45063081 to 45063129 48 + TSS region transcription start site region 66522
Ntf5 7 45063119 to 45066603 3484 + protein coding gene neurotrophin 5
Cpgi19055 7 45065039 to 45065530 491 CpG island CpG island 19055
Lhb 7 45066912 to 45071279 4367 + protein coding gene luteinizing hormone beta
Tssr66523 7 45067752 to 45067784 32 + TSS region transcription start site region 66523
Cpgi19056 7 45069445 to 45069773 328 CpG island CpG island 19056
Tssr66524 7 45070330 to 45070338 8 + TSS region transcription start site region 66524
Tssr66525 7 45070363 to 45070370 7 + TSS region transcription start site region 66525
Ruvbl2 7 45071320 to 45084810 13490 - protein coding gene RuvB-like protein 2
Tssr72385 7 45071860 to 45071896 36 - TSS region transcription start site region 72385
Tssr72386 7 45071897 to 45071911 14 - TSS region transcription start site region 72386
Tssr72387 7 45083691 to 45083732 41 - TSS region transcription start site region 72387
Cpgi19057 7 45083709 to 45084722 1013 CpG island CpG island 19057
Tssr2249 7 45083856 to 45083875 19 - TSS region transcription start site region 2249
Tssr72388 7 45083876 to 45083902 26 - TSS region transcription start site region 72388
Tssr72389 7 45084014 to 45084070 56 - TSS region transcription start site region 72389
Tssr66526 7 45084257 to 45084295 38 + TSS region transcription start site region 66526
Gys1 7 45084268 to 45106043 21775 + protein coding gene glycogen synthase 1, muscle
Tssr66527 7 45084300 to 45084313 13 + TSS region transcription start site region 66527
Tssr66528 7 45084359 to 45084397 38 + TSS region transcription start site region 66528
Cpgi19058 7 45087419 to 45087687 268 CpG island CpG island 19058
Tssr66529 7 45087432 to 45087457 25 + TSS region transcription start site region 66529
Cpgi19059 7 45088938 to 45089101 163 CpG island CpG island 19059
Tssr66530 7 45089034 to 45089043 9 + TSS region transcription start site region 66530
Tssr66531 7 45089269 to 45089276 7 + TSS region transcription start site region 66531
Tssr66532 7 45089319 to 45089332 13 + TSS region transcription start site region 66532
Tssr66533 7 45093883 to 45093897 14 + TSS region transcription start site region 66533
Tssr66534 7 45097290 to 45097302 12 + TSS region transcription start site region 66534
Tssr66535 7 45097310 to 45097318 8 + TSS region transcription start site region 66535
Tssr66536 7 45097320 to 45097331 11 + TSS region transcription start site region 66536
Tssr66537 7 45098318 to 45098337 19 + TSS region transcription start site region 66537
Tssr66538 7 45098403 to 45098425 22 + TSS region transcription start site region 66538
Ftl1 7 45107368 to 45109308 1940 - protein coding gene ferritin light polypeptide 1
Tssr66539 7 45107507 to 45107510 3 + TSS region transcription start site region 66539
Tssr66540 7 45107598 to 45107614 16 + TSS region transcription start site region 66540
Tssr72390 7 45107607 to 45107626 19 - TSS region transcription start site region 72390
Tssr72391 7 45107641 to 45107648 7 - TSS region transcription start site region 72391
Tssr72392 7 45107768 to 45107772 4 - TSS region transcription start site region 72392
Tssr72393 7 45107816 to 45107837 21 - TSS region transcription start site region 72393
Tssr72394 7 45107949 to 45107983 34 - TSS region transcription start site region 72394
Cpgi19060 7 45108454 to 45108854 400 CpG island CpG island 19060
Tssr72395 7 45108823 to 45108849 26 - TSS region transcription start site region 72395
Tssr72396 7 45108855 to 45108881 26 - TSS region transcription start site region 72396
Gm10252 7 45108893 to 45109724 831 + unclassified gene predicted gene 10252
Tssr66541 7 45109085 to 45109112 27 + TSS region transcription start site region 66541
Tssr72397 7 45109112 to 45109155 43 - TSS region transcription start site region 72397
Cpgi19061 7 45109248 to 45109558 310 CpG island CpG island 19061
Tssr72398 7 45109263 to 45109305 42 - TSS region transcription start site region 72398
Tssr72399 7 45110346 to 45110370 24 - TSS region transcription start site region 72399
Tssr72400 7 45110384 to 45110401 17 - TSS region transcription start site region 72400
Tssr66542 7 45110488 to 45110524 36 + TSS region transcription start site region 66542
Bax 7 45111121 to 45116322 5201 - protein coding gene BCL2-associated X protein
Tssr72401 7 45114678 to 45114681 3 - TSS region transcription start site region 72401
Gm45808 7 45115408 to 45136235 20827 - protein coding gene predicted gene 45808
Tssr72402 7 45115696 to 45115722 26 - TSS region transcription start site region 72402
Cpgi19062 7 45115732 to 45116507 775 CpG island CpG island 19062
Tssr72403 7 45115802 to 45115852 50 - TSS region transcription start site region 72403
Tssr72404 7 45115895 to 45115911 16 - TSS region transcription start site region 72404
Tssr72405 7 45115936 to 45115966 30 - TSS region transcription start site region 72405
Tssr72406 7 45115974 to 45116011 37 - TSS region transcription start site region 72406
Tssr72407 7 45116203 to 45116214 11 - TSS region transcription start site region 72407
Tssr72408 7 45116217 to 45116278 61 - TSS region transcription start site region 72408
Tssr72409 7 45116296 to 45116307 11 - TSS region transcription start site region 72409
Tssr72410 7 45116318 to 45116325 7 - TSS region transcription start site region 72410
Dhdh 7 45122380 to 45138312 15932 - protein coding gene dihydrodiol dehydrogenase (dimeric)
Tssr72411 7 45123700 to 45123723 23 - TSS region transcription start site region 72411
Tssr72412 7 45123885 to 45123891 6 - TSS region transcription start site region 72412
Tssr72413 7 45124075 to 45124106 31 - TSS region transcription start site region 72413
Tssr72414 7 45124217 to 45124238 21 - TSS region transcription start site region 72414
Tssr72415 7 45124359 to 45124385 26 - TSS region transcription start site region 72415
Tssr72416 7 45124427 to 45124440 13 - TSS region transcription start site region 72416
Tssr72417 7 45124483 to 45124499 16 - TSS region transcription start site region 72417
Tssr66543 7 45131176 to 45131190 14 + TSS region transcription start site region 66543
Tulp2 7 45131450 to 45173070 41620 + protein coding gene tubby-like protein 2
Tssr72418 7 45133920 to 45133947 27 - TSS region transcription start site region 72418
Tssr66544 7 45135683 to 45135698 15 + TSS region transcription start site region 66544
Tssr66545 7 45135703 to 45135740 37 + TSS region transcription start site region 66545
Tssr66546 7 45135762 to 45135763 1 + TSS region transcription start site region 66546
Tssr66547 7 45135784 to 45135823 39 + TSS region transcription start site region 66547
Cpgi19063 7 45138000 to 45138470 470 CpG island CpG island 19063
Tssr72419 7 45138198 to 45138226 28 - TSS region transcription start site region 72419
Tssr72420 7 45138259 to 45138284 25 - TSS region transcription start site region 72420
Nucb1 7 45142098 to 45159832 17734 - protein coding gene nucleobindin 1
Tssr72421 7 45142998 to 45143028 30 - TSS region transcription start site region 72421
Tssr72422 7 45143138 to 45143150 12 - TSS region transcription start site region 72422
Cpgi19064 7 45159094 to 45159993 899 CpG island CpG island 19064
Tssr72423 7 45159775 to 45159784 9 - TSS region transcription start site region 72423
Tssr72424 7 45159790 to 45159823 33 - TSS region transcription start site region 72424
Tssr72425 7 45159824 to 45159837 13 - TSS region transcription start site region 72425
Gm45478 7 45161781 to 45161991 210 - pseudogene predicted gene 45478
D7Mit81 7 45161966 to 45162110 144 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 81
Tssr66548 7 45163125 to 45163134 9 + TSS region transcription start site region 66548
Tssr66549 7 45163142 to 45163171 29 + TSS region transcription start site region 66549
Tssr66550 7 45164020 to 45164038 18 + TSS region transcription start site region 66550
Tssr66551 7 45164043 to 45164066 23 + TSS region transcription start site region 66551
Tssr66552 7 45167663 to 45167687 24 + TSS region transcription start site region 66552
Cpgi19065 7 45171206 to 45171735 529 CpG island CpG island 19065
Tssr72426 7 45171451 to 45171487 36 - TSS region transcription start site region 72426
Ppp1r15a 7 45172341 to 45175692 3351 - protein coding gene protein phosphatase 1, regulatory subunit 15A
Tssr72427 7 45173339 to 45173397 58 - TSS region transcription start site region 72427
Bw1n 7 118693530 to 45161966 -73531564 QTL body weight 1 in NSY