Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:44971222-45017638

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpt1c 7 44959372 to 44974851 15479 - protein coding gene carnitine palmitoyltransferase 1c
6530437J22Rik 7 44970429 to 44974303 3874 + antisense lncRNA gene RIKEN cDNA 6530437J22 gene
Tssr72262 7 44974444 to 44974455 11 - TSS region transcription start site region 72262
Tssr72263 7 44974711 to 44974730 19 - TSS region transcription start site region 72263
Tssr72264 7 44974742 to 44974779 37 - TSS region transcription start site region 72264
Tssr72265 7 44974781 to 44974824 43 - TSS region transcription start site region 72265
Prmt1 7 44976755 to 44986420 9665 - protein coding gene protein arginine N-methyltransferase 1
Cpgi19008 7 44985324 to 44987543 2219 CpG island CpG island 19008
Tssr72266 7 44986313 to 44986352 39 - TSS region transcription start site region 72266
Tssr72267 7 44986389 to 44986400 11 - TSS region transcription start site region 72267
Tssr66455 7 44986881 to 44986945 64 + TSS region transcription start site region 66455
Gm15545 7 44986900 to 44994597 7697 + antisense lncRNA gene predicted gene 15545
Bcl2l12 7 44991222 to 44997638 6416 - protein coding gene BCL2-like 12 (proline rich)
Cpgi19009 7 44997162 to 44998232 1070 CpG island CpG island 19009
Tssr72268 7 44997221 to 44997276 55 - TSS region transcription start site region 72268
Tssr72269 7 44997528 to 44997534 6 - TSS region transcription start site region 72269
Tssr72270 7 44997535 to 44997605 70 - TSS region transcription start site region 72270
Tssr66456 7 44997608 to 44997619 11 + TSS region transcription start site region 66456
Irf3 7 44997648 to 45002848 5200 + protein coding gene interferon regulatory factor 3
Tssr66457 7 44997660 to 44997700 40 + TSS region transcription start site region 66457
Tssr66458 7 44997749 to 44997760 11 + TSS region transcription start site region 66458
Cpgi19010 7 44998663 to 44998900 237 CpG island CpG island 19010
Scaf1 7 45002946 to 45016359 13413 - protein coding gene SR-related CTD-associated factor 1
Tssr72271 7 45008727 to 45008751 24 - TSS region transcription start site region 72271
Tssr72272 7 45008891 to 45008913 22 - TSS region transcription start site region 72272
Mir7054 7 45012426 to 45012487 61 - miRNA gene microRNA 7054
Tssr72273 7 45013510 to 45013535 25 - TSS region transcription start site region 72273
Cpgi19011 7 45015640 to 45016530 890 CpG island CpG island 19011
Tssr72274 7 45016080 to 45016133 53 - TSS region transcription start site region 72274
Tssr72275 7 45016224 to 45016296 72 - TSS region transcription start site region 72275
Gm45982 7 45016400 to 45017692 1292 + lncRNA gene predicted gene, 45982
Tssr66459 7 45016587 to 45016608 21 + TSS region transcription start site region 66459
Tssr72276 7 45017240 to 45017255 15 - TSS region transcription start site region 72276
Tssr72277 7 45017267 to 45017279 12 - TSS region transcription start site region 72277
Tssr72278 7 45017280 to 45017291 11 - TSS region transcription start site region 72278