Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:44921900-45059597

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ap2a1 7 44900373 to 44929490 29117 - protein coding gene adaptor-related protein complex 2, alpha 1 subunit
Tssr72258 7 44928669 to 44928681 12 - TSS region transcription start site region 72258
Cpgi19005 7 44929000 to 44930114 1114 CpG island CpG island 19005
Tssr72259 7 44929391 to 44929402 11 - TSS region transcription start site region 72259
Tssr72260 7 44929410 to 44929521 111 - TSS region transcription start site region 72260
Tssr72261 7 44929528 to 44929537 9 - TSS region transcription start site region 72261
Tssr66450 7 44929718 to 44929725 7 + TSS region transcription start site region 66450
Tssr66451 7 44929736 to 44929760 24 + TSS region transcription start site region 66451
Tssr66452 7 44929764 to 44929773 9 + TSS region transcription start site region 66452
Tsks 7 44943204 to 44958035 14831 + protein coding gene testis-specific serine kinase substrate
Tssr66453 7 44943205 to 44943214 9 + TSS region transcription start site region 66453
Tssr66454 7 44943234 to 44943251 17 + TSS region transcription start site region 66454
Cpgi19006 7 44952653 to 44952965 312 CpG island CpG island 19006
Cpt1c 7 44959372 to 44974851 15479 - protein coding gene carnitine palmitoyltransferase 1c
D7Dcr15 7 44968186 to 44968286 100 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 15
Cpgi19007 7 44970286 to 44970977 691 CpG island CpG island 19007
6530437J22Rik 7 44970429 to 44974303 3874 + antisense lncRNA gene RIKEN cDNA 6530437J22 gene
Tssr72262 7 44974444 to 44974455 11 - TSS region transcription start site region 72262
Tssr72263 7 44974711 to 44974730 19 - TSS region transcription start site region 72263
Tssr72264 7 44974742 to 44974779 37 - TSS region transcription start site region 72264
Tssr72265 7 44974781 to 44974824 43 - TSS region transcription start site region 72265
Prmt1 7 44976755 to 44986420 9665 - protein coding gene protein arginine N-methyltransferase 1
Cpgi19008 7 44985324 to 44987543 2219 CpG island CpG island 19008
Tssr72266 7 44986313 to 44986352 39 - TSS region transcription start site region 72266
Tssr72267 7 44986389 to 44986400 11 - TSS region transcription start site region 72267
Tssr66455 7 44986881 to 44986945 64 + TSS region transcription start site region 66455
Gm15545 7 44986900 to 44994597 7697 + antisense lncRNA gene predicted gene 15545
Bcl2l12 7 44991222 to 44997638 6416 - protein coding gene BCL2-like 12 (proline rich)
Cpgi19009 7 44997162 to 44998232 1070 CpG island CpG island 19009
Tssr72268 7 44997221 to 44997276 55 - TSS region transcription start site region 72268
Tssr72269 7 44997528 to 44997534 6 - TSS region transcription start site region 72269
Tssr72270 7 44997535 to 44997605 70 - TSS region transcription start site region 72270
Tssr66456 7 44997608 to 44997619 11 + TSS region transcription start site region 66456
Irf3 7 44997648 to 45002848 5200 + protein coding gene interferon regulatory factor 3
Tssr66457 7 44997660 to 44997700 40 + TSS region transcription start site region 66457
Tssr66458 7 44997749 to 44997760 11 + TSS region transcription start site region 66458
Cpgi19010 7 44998663 to 44998900 237 CpG island CpG island 19010
Scaf1 7 45002946 to 45016359 13413 - protein coding gene SR-related CTD-associated factor 1
Tssr72271 7 45008727 to 45008751 24 - TSS region transcription start site region 72271
Tssr72272 7 45008891 to 45008913 22 - TSS region transcription start site region 72272
Mir7054 7 45012426 to 45012487 61 - miRNA gene microRNA 7054
Tssr72273 7 45013510 to 45013535 25 - TSS region transcription start site region 72273
Cpgi19011 7 45015640 to 45016530 890 CpG island CpG island 19011
Tssr72274 7 45016080 to 45016133 53 - TSS region transcription start site region 72274
Tssr72275 7 45016224 to 45016296 72 - TSS region transcription start site region 72275
Gm45982 7 45016400 to 45017692 1292 + lncRNA gene predicted gene, 45982
Tssr66459 7 45016587 to 45016608 21 + TSS region transcription start site region 66459
Tssr72276 7 45017240 to 45017255 15 - TSS region transcription start site region 72276
Tssr72277 7 45017267 to 45017279 12 - TSS region transcription start site region 72277
Tssr72278 7 45017280 to 45017291 11 - TSS region transcription start site region 72278
Cpgi19012 7 45017794 to 45018310 516 CpG island CpG island 19012
Tssr66460 7 45017863 to 45017872 9 + TSS region transcription start site region 66460
Tssr66461 7 45017915 to 45017931 16 + TSS region transcription start site region 66461
Tssr66462 7 45017933 to 45017938 5 + TSS region transcription start site region 66462
Tssr66463 7 45017943 to 45017946 3 + TSS region transcription start site region 66463
Tssr66464 7 45017953 to 45018009 56 + TSS region transcription start site region 66464
Rras 7 45018007 to 45021647 3640 + protein coding gene related RAS viral (r-ras) oncogene
Tssr66465 7 45018010 to 45018021 11 + TSS region transcription start site region 66465
Tssr66466 7 45018091 to 45018111 20 + TSS region transcription start site region 66466
Tssr72279 7 45019273 to 45019290 17 - TSS region transcription start site region 72279
Tssr72280 7 45019298 to 45019341 43 - TSS region transcription start site region 72280
Prr12 7 45027707 to 45052881 25174 - protein coding gene proline rich 12
Tssr72281 7 45027931 to 45027967 36 - TSS region transcription start site region 72281
Tssr72282 7 45050910 to 45050939 29 - TSS region transcription start site region 72282
Cpgi19013 7 45051549 to 45052233 684 CpG island CpG island 19013
Cpgi19014 7 45052395 to 45054555 2160 CpG island CpG island 19014
Tssr72283 7 45052865 to 45052914 49 - TSS region transcription start site region 72283
Tssr72284 7 45053055 to 45053064 9 - TSS region transcription start site region 72284
Tssr72285 7 45053304 to 45053342 38 - TSS region transcription start site region 72285
Prrg2 7 45053584 to 45062677 9093 - protein coding gene proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
Tssr72286 7 45053950 to 45053984 34 - TSS region transcription start site region 72286
Tssr72287 7 45054191 to 45054223 32 - TSS region transcription start site region 72287
Tssr72288 7 45057055 to 45057064 9 - TSS region transcription start site region 72288