Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:44508882-44598891

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mybpc2 7 44501699 to 44524656 22957 - protein coding gene myosin binding protein C, fast-type
Tssr66392 7 44516927 to 44516940 13 + TSS region transcription start site region 66392
Tssr66393 7 44516941 to 44516958 17 + TSS region transcription start site region 66393
Tssr2236 7 44516960 to 44516973 13 + TSS region transcription start site region 2236
Cpgi18971 7 44521667 to 44522099 432 CpG island CpG island 18971
Tssr72209 7 44524642 to 44524663 21 - TSS region transcription start site region 72209
Cpgi18972 7 44525138 to 44525299 161 CpG island CpG island 18972
Spib 7 44525993 to 44532071 6078 - protein coding gene Spi-B transcription factor (Spi-1/PU.1 related)
Cpgi18973 7 44527728 to 44528328 600 CpG island CpG island 18973
Tssr72210 7 44529607 to 44529618 11 - TSS region transcription start site region 72210
Tssr72211 7 44529643 to 44529660 17 - TSS region transcription start site region 72211
Tssr72212 7 44531367 to 44531381 14 - TSS region transcription start site region 72212
Tssr72213 7 44531386 to 44531399 13 - TSS region transcription start site region 72213
Tssr66394 7 44531534 to 44531578 44 + TSS region transcription start site region 66394
Tssr72214 7 44532064 to 44532078 14 - TSS region transcription start site region 72214
Pold1 7 44532744 to 44548815 16071 - protein coding gene polymerase (DNA directed), delta 1, catalytic subunit
Tssr66395 7 44533686 to 44533691 5 + TSS region transcription start site region 66395
Tssr72215 7 44534277 to 44534288 11 - TSS region transcription start site region 72215
Tssr72216 7 44534295 to 44534316 21 - TSS region transcription start site region 72216
Mir7053 7 44538106 to 44538178 72 - miRNA gene microRNA 7053
Cpgi18974 7 44538787 to 44539491 704 CpG island CpG island 18974
Gm44833 7 44545147 to 44545477 330 + pseudogene predicted gene 44833
Cpgi18975 7 44548351 to 44549068 717 CpG island CpG island 18975
Tssr72217 7 44548750 to 44548833 83 - TSS region transcription start site region 72217
Nr1h2 7 44549616 to 44553951 4335 - protein coding gene nuclear receptor subfamily 1, group H, member 2
Tssr72218 7 44552060 to 44552071 11 - TSS region transcription start site region 72218
Cpgi18976 7 44553406 to 44554063 657 CpG island CpG island 18976
Tssr2237 7 44553882 to 44553891 9 - TSS region transcription start site region 2237
Tssr72219 7 44553901 to 44553955 54 - TSS region transcription start site region 72219
Tssr66396 7 44554098 to 44554118 20 + TSS region transcription start site region 66396
Tssr66397 7 44572317 to 44572325 8 + TSS region transcription start site region 66397
Tssr66398 7 44572348 to 44572360 12 + TSS region transcription start site region 66398
Tssr66399 7 44572370 to 44572416 46 + TSS region transcription start site region 66399
Napsa 7 44572445 to 44586846 14401 + protein coding gene napsin A aspartic peptidase
Tssr2238 7 44572558 to 44572569 11 + TSS region transcription start site region 2238
Tssr66400 7 44572584 to 44572617 33 + TSS region transcription start site region 66400
Tssr66401 7 44573307 to 44573311 4 + TSS region transcription start site region 66401
Gm15396 7 44579968 to 44590619 10651 - antisense lncRNA gene predicted gene 15396
Tssr66402 7 44585038 to 44585065 27 + TSS region transcription start site region 66402
Cpgi18977 7 44586596 to 44587449 853 CpG island CpG island 18977
Tssr66403 7 44587339 to 44587375 36 + TSS region transcription start site region 66403
Gm45981 7 44587378 to 44590368 2990 + lncRNA gene predicted gene, 45981
Cpgi18978 7 44589072 to 44589609 537 CpG island CpG island 18978
Cpgi18979 7 44590483 to 44592103 1620 CpG island CpG island 18979
Kcnc3 7 44590661 to 44604751 14090 + protein coding gene potassium voltage gated channel, Shaw-related subfamily, member 3
Tssr66404 7 44590886 to 44590905 19 + TSS region transcription start site region 66404
Tssr66405 7 44590906 to 44590917 11 + TSS region transcription start site region 66405
Tssr66406 7 44590918 to 44590919 1 + TSS region transcription start site region 66406
Tssr66407 7 44591193 to 44591204 11 + TSS region transcription start site region 66407
Tssr66408 7 44591220 to 44591237 17 + TSS region transcription start site region 66408
Tssr66409 7 44593016 to 44593025 9 + TSS region transcription start site region 66409
Gm44832 7 44593577 to 44595879 2302 - antisense lncRNA gene predicted gene 44832
Cpgi18980 7 44593837 to 44594103 266 CpG island CpG island 18980
Tssr2239 7 44595263 to 44595273 10 + TSS region transcription start site region 2239
Cpgi18981 7 44595274 to 44595701 427 CpG island CpG island 18981
Tssr66410 7 44595317 to 44595329 12 + TSS region transcription start site region 66410
Tssr66411 7 44596029 to 44596037 8 + TSS region transcription start site region 66411
Tssr66412 7 44596043 to 44596055 12 + TSS region transcription start site region 66412
Tssr66413 7 44598375 to 44598389 14 + TSS region transcription start site region 66413