Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:44130430-44320451

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45122 7 44123258 to 44135543 12285 - pseudogene predicted gene 45122
Klk1b23-ps 7 44132645 to 44133313 668 + pseudogene kallikrein 1-related peptidase b23, pseudogene
Klk1b16 7 44136767 to 44141610 4843 + protein coding gene kallikrein 1-related peptidase b16
Tssr66103 7 44137250 to 44137257 7 + TSS region transcription start site region 66103
Tssr66104 7 44137264 to 44137289 25 + TSS region transcription start site region 66104
Tssr66105 7 44140589 to 44140610 21 + TSS region transcription start site region 66105
Gm45136 7 44156844 to 44157786 942 - unclassified gene predicted gene 45136
Tssr66106 7 44188205 to 44188222 17 + TSS region transcription start site region 66106
Klk1b24 7 44188236 to 44192455 4219 + protein coding gene kallikrein 1-related peptidase b24
Gm44779 7 44193194 to 44195628 2434 - pseudogene predicted gene 44779
Tssr66107 7 44198107 to 44198138 31 + TSS region transcription start site region 66107
Tssr66108 7 44198179 to 44198183 4 + TSS region transcription start site region 66108
Klk1b3 7 44198191 to 44202351 4160 + protein coding gene kallikrein 1-related peptidase b3
Lbw5 7 44198191 to 44202351 4160 QTL lupus NZB x NZW 5
Tssr66109 7 44198194 to 44198216 22 + TSS region transcription start site region 66109
Tssr66110 7 44200997 to 44201028 31 + TSS region transcription start site region 66110
D7Nds5 7 44201025 to 44201166 141 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 5
Gm44605 7 44202703 to 44204293 1590 - pseudogene predicted gene 44605
Tssr66111 7 44207307 to 44207329 22 + TSS region transcription start site region 66111
psrt 7 44207435 to 51995005 7787570 heritable phenotypic marker profound seizures and runting
Klk1b4 7 44207435 to 44211754 4319 + protein coding gene kallikrein 1-related pepidase b4
l7R4 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 4
l7R5 7 44207435 to 51995005 7787570 heritable phenotypic marker lethal, Chr 7, Oak Ridge 5
fit2 7 44207435 to 51995005 7787570 heritable phenotypic marker fitness 2
Tssr66112 7 44209598 to 44209612 14 + TSS region transcription start site region 66112
Tssr2219 7 44210691 to 44210701 10 + TSS region transcription start site region 2219
Gm45134 7 44212069 to 44214718 2649 - pseudogene predicted gene 45134
Tssr66113 7 44216332 to 44216382 50 + TSS region transcription start site region 66113
Tssr66114 7 44216456 to 44216466 10 + TSS region transcription start site region 66114
Klk1b5 7 44216474 to 44220703 4229 + protein coding gene kallikrein 1-related peptidase b5
Tssr66115 7 44218557 to 44218561 4 + TSS region transcription start site region 66115
Tssr2220 7 44219245 to 44219278 33 + TSS region transcription start site region 2220
Gm10109 7 44221017 to 44227421 6404 - pseudogene predicted gene 10109
Tssr66116 7 44225328 to 44225359 31 + TSS region transcription start site region 66116
Klk1 7 44225360 to 44229618 4258 + protein coding gene kallikrein 1
Tssr66117 7 44225430 to 44225451 21 + TSS region transcription start site region 66117
Tssr66118 7 44227622 to 44227631 9 + TSS region transcription start site region 66118
Tssr66119 7 44228344 to 44228356 12 + TSS region transcription start site region 66119
1700028J19Rik 7 44229930 to 44236122 6192 - lncRNA gene RIKEN cDNA 1700028J19 gene
Tssr72184 7 44236086 to 44236093 7 - TSS region transcription start site region 72184
Tssr72185 7 44236098 to 44236124 26 - TSS region transcription start site region 72185
Tssr72186 7 44236129 to 44236132 3 - TSS region transcription start site region 72186
Tssr66120 7 44236137 to 44236142 5 + TSS region transcription start site region 66120
Tssr66121 7 44236149 to 44236183 34 + TSS region transcription start site region 66121
Gm36864 7 44236177 to 44243191 7014 + protein coding gene predicted gene, 36864
Tssr66122 7 44236190 to 44236202 12 + TSS region transcription start site region 66122
Gm25386 7 44239748 to 44240035 287 + unclassified non-coding RNA gene predicted gene, 25386
Tssr72187 7 44241224 to 44241240 16 - TSS region transcription start site region 72187
Tssr72188 7 44241246 to 44241262 16 - TSS region transcription start site region 72188
Tssr72189 7 44241271 to 44241281 10 - TSS region transcription start site region 72189
Cpgi18948 7 44246144 to 44247397 1253 CpG island CpG island 18948
Tssr72190 7 44246690 to 44246710 20 - TSS region transcription start site region 72190
2410002F23Rik 7 44246722 to 44252319 5597 + protein coding gene RIKEN cDNA 2410002F23 gene
Gm28496 7 44246726 to 44262720 15994 + unclassified non-coding RNA gene predicted gene 28496
Tssr66123 7 44246777 to 44246796 19 + TSS region transcription start site region 66123
Gm26247 7 44248090 to 44248180 90 + snoRNA gene predicted gene, 26247
Snord88c 7 44249855 to 44249938 83 + snoRNA gene small nucleolar RNA, C/D box 88C
Snord88a 7 44250150 to 44250221 71 + snoRNA gene small nucleolar RNA, C/D box 88A
Gm23991 7 44250450 to 44250542 92 + snoRNA gene predicted gene, 23991
Acp4 7 44252148 to 44257378 5230 - protein coding gene acid phosphatase 4
Tssr66124 7 44261424 to 44261502 78 + TSS region transcription start site region 66124
Gm15517 7 44261447 to 44261891 444 + protein coding gene predicted gene 15517
Cpgi18949 7 44262932 to 44263480 548 CpG island CpG island 18949
Gm18905 7 44267789 to 44268716 927 - pseudogene predicted gene, 18905
D7Dcr14 7 44269572 to 44269667 95 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 14
Gm18307 7 44281426 to 44282286 860 - pseudogene predicted gene, 18307
Gm7238 7 44299915 to 44300887 972 - pseudogene predicted gene 7238
Clec11a 7 44303766 to 44306959 3193 - protein coding gene C-type lectin domain family 11, member a
Cpgi18950 7 44304439 to 44305537 1098 CpG island CpG island 18950
Tssr72191 7 44304863 to 44304900 37 - TSS region transcription start site region 72191
Cpgi18951 7 44305773 to 44306117 344 CpG island CpG island 18951
Tssr72192 7 44306903 to 44306953 50 - TSS region transcription start site region 72192
Tssr72193 7 44306995 to 44307004 9 - TSS region transcription start site region 72193
Cpgi18952 7 44309938 to 44311487 1549 CpG island CpG island 18952
Tssr66125 7 44310190 to 44310205 15 + TSS region transcription start site region 66125
Tssr66126 7 44310213 to 44310242 29 + TSS region transcription start site region 66126
Shank1 7 44310253 to 44360572 50319 + protein coding gene SH3 and multiple ankyrin repeat domains 1
Gm44757 7 44314751 to 44314907 156 + unclassified gene predicted gene 44757
Tssr66127 7 44319794 to 44319808 14 + TSS region transcription start site region 66127
Tssr66128 7 44319809 to 44319835 26 + TSS region transcription start site region 66128