Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:43079550-43609787

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137 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17768 7 43078051 to 43096419 18368 + lincRNA gene predicted gene, 17768
Rpl18a-ps4 7 43082123 to 43082658 535 - pseudogene ribosomal protein L18A, pseudogene 4
Tssr65976 7 43091596 to 43091601 5 + TSS region transcription start site region 65976
Gm10351 7 43099719 to 43099843 124 + protein coding gene predicted gene 10351
Gm46011 7 43153158 to 43155410 2252 + protein coding gene predicted gene, 46011
Gm18208 7 43155806 to 43156653 847 + pseudogene predicted gene, 18208
Tssr65977 7 43177575 to 43177609 34 + TSS region transcription start site region 65977
Zfp936 7 43177588 to 43192109 14521 + protein coding gene zinc finger protein 936
Gm22707 7 43204352 to 43204461 109 + miRNA gene predicted gene, 22707
Tssr65978 7 43214019 to 43214053 34 + TSS region transcription start site region 65978
EU599041 7 43214039 to 43226842 12803 + lincRNA gene expressed sequence EU599041
Tssr65979 7 43221765 to 43221768 3 + TSS region transcription start site region 65979
Tssr65980 7 43253739 to 43253773 34 + TSS region transcription start site region 65980
Gm35588 7 43253741 to 43265645 11904 + protein coding gene predicted gene, 35588
Tssr65981 7 43267668 to 43267682 14 + TSS region transcription start site region 65981
Cpgi18929 7 43283195 to 43283404 209 CpG island CpG island 18929
Zfp715 7 43296522 to 43313309 16787 - protein coding gene zinc finger protein 715
Tssr72129 7 43310750 to 43310751 1 - TSS region transcription start site region 72129
Cpgi18930 7 43312524 to 43313437 913 CpG island CpG island 18930
Tssr72130 7 43313096 to 43313116 20 - TSS region transcription start site region 72130
Tssr72131 7 43313233 to 43313285 52 - TSS region transcription start site region 72131
Gm44539 7 43344550 to 43344787 237 + pseudogene predicted gene 44539
Siglecf 7 43351341 to 43359475 8134 + protein coding gene sialic acid binding Ig-like lectin F
Tssr65982 7 43351378 to 43351412 34 + TSS region transcription start site region 65982
Tssr65983 7 43351418 to 43351456 38 + TSS region transcription start site region 65983
Tssr2208 7 43376817 to 43376822 5 - TSS region transcription start site region 2208
Gm10298 7 43387680 to 43387944 264 - pseudogene predicted gene 10298
Gm44540 7 43394535 to 43395264 729 + pseudogene predicted gene 44540
Tssr72132 7 43399514 to 43399523 9 - TSS region transcription start site region 72132
Tssr65984 7 43408187 to 43408211 24 + TSS region transcription start site region 65984
Siglecg 7 43408204 to 43418358 10154 + protein coding gene sialic acid binding Ig-like lectin G
Tssr65985 7 43408214 to 43408220 6 + TSS region transcription start site region 65985
Tssr65986 7 43408228 to 43408256 28 + TSS region transcription start site region 65986
Tssr65987 7 43408262 to 43408273 11 + TSS region transcription start site region 65987
Tssr65988 7 43408274 to 43408285 11 + TSS region transcription start site region 65988
Tssr65989 7 43408482 to 43408518 36 + TSS region transcription start site region 65989
Tssr65990 7 43408519 to 43408539 20 + TSS region transcription start site region 65990
Tssr65991 7 43409252 to 43409262 10 + TSS region transcription start site region 65991
Tssr65992 7 43409263 to 43409273 10 + TSS region transcription start site region 65992
Tssr65993 7 43409296 to 43409301 5 + TSS region transcription start site region 65993
Tssr65994 7 43409409 to 43409420 11 + TSS region transcription start site region 65994
Gm38999 7 43427643 to 43429836 2193 + protein coding gene predicted gene, 38999
Tssr65995 7 43427644 to 43427652 8 + TSS region transcription start site region 65995
Tssr65996 7 43427664 to 43427679 15 + TSS region transcription start site region 65996
Tssr65997 7 43430067 to 43430082 15 + TSS region transcription start site region 65997
Tssr65998 7 43430092 to 43430114 22 + TSS region transcription start site region 65998
Lim2 7 43430101 to 43435991 5890 + protein coding gene lens intrinsic membrane protein 2
Tssr2209 7 43432086 to 43432091 5 + TSS region transcription start site region 2209
Tssr65999 7 43436966 to 43436981 15 + TSS region transcription start site region 65999
Tssr2210 7 43437008 to 43437019 11 + TSS region transcription start site region 2210
Tssr66000 7 43437132 to 43437174 42 + TSS region transcription start site region 66000
Nkg7 7 43437138 to 43438246 1108 + protein coding gene natural killer cell group 7 sequence
Tssr66001 7 43437586 to 43437596 10 + TSS region transcription start site region 66001
Tssr66002 7 43437600 to 43437624 24 + TSS region transcription start site region 66002
Cldnd2 7 43440782 to 43443334 2552 + protein coding gene claudin domain containing 2
Tssr66003 7 43440821 to 43440840 19 + TSS region transcription start site region 66003
Tssr66004 7 43440845 to 43440855 10 + TSS region transcription start site region 66004
Cpgi18931 7 43443249 to 43444337 1088 CpG island CpG island 18931
Tssr72133 7 43443920 to 43443937 17 - TSS region transcription start site region 72133
Etfb 7 43444083 to 43457800 13717 + protein coding gene electron transferring flavoprotein, beta polypeptide
Tssr66005 7 43444104 to 43444142 38 + TSS region transcription start site region 66005
Etfbl 7 43444128 to 43463587 19459 + protein coding gene electron transferring flavoprotein, beta polypeptide like
Gm44816 7 43448073 to 43448549 476 + unclassified gene predicted gene 44816
Mir7051 7 43457497 to 43457569 72 + miRNA gene microRNA 7051
Gm39000 7 43461500 to 43464170 2670 - lncRNA gene predicted gene, 39000
Tssr2211 7 43462322 to 43462328 6 + TSS region transcription start site region 2211
Tssr66006 7 43463108 to 43463113 5 + TSS region transcription start site region 66006
Tssr66007 7 43463145 to 43463185 40 + TSS region transcription start site region 66007
Vsig10l 7 43463151 to 43472019 8868 + protein coding gene V-set and immunoglobulin domain containing 10 like
Tssr66008 7 43463187 to 43463215 28 + TSS region transcription start site region 66008
Tssr66009 7 43463219 to 43463226 7 + TSS region transcription start site region 66009
Tssr72134 7 43464246 to 43464252 6 - TSS region transcription start site region 72134
Cpgi18932 7 43464831 to 43466011 1180 CpG island CpG island 18932
Tssr72135 7 43465563 to 43465590 27 - TSS region transcription start site region 72135
Tssr66010 7 43466008 to 43466021 13 + TSS region transcription start site region 66010
Cpgi18933 7 43466162 to 43466815 653 CpG island CpG island 18933
Iglon5 7 43472907 to 43490049 17142 - protein coding gene IgLON family member 5
Tssr72136 7 43473517 to 43473538 21 - TSS region transcription start site region 72136
Tssr72137 7 43473539 to 43473577 38 - TSS region transcription start site region 72137
D7Dcr12 7 43474097 to 43474192 95 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 12
Cpgi18934 7 43475784 to 43476126 342 CpG island CpG island 18934
Cpgi18935 7 43476467 to 43476940 473 CpG island CpG island 18935
Tssr72138 7 43480377 to 43480387 10 - TSS region transcription start site region 72138
D7Mit157 7 43482947 to 43483096 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 157
Cpgi18936 7 43489598 to 43490352 754 CpG island CpG island 18936
Tssr72139 7 43489967 to 43490016 49 - TSS region transcription start site region 72139
Tssr72140 7 43490180 to 43490224 44 - TSS region transcription start site region 72140
4931406B18Rik 7 43492044 to 43505940 13896 - protein coding gene RIKEN cDNA 4931406B18 gene
Tssr72141 7 43505926 to 43505944 18 - TSS region transcription start site region 72141
Tssr66011 7 43506921 to 43506949 28 + TSS region transcription start site region 66011
Gm9278 7 43506951 to 43507503 552 + pseudogene predicted gene 9278
Gm2511 7 43511165 to 43518970 7805 - lincRNA gene predicted gene 2511
Tssr72142 7 43518546 to 43518561 15 - TSS region transcription start site region 72142
Tssr72143 7 43518562 to 43518572 10 - TSS region transcription start site region 72143
Tssr72144 7 43525223 to 43525235 12 - TSS region transcription start site region 72144
Tssr72145 7 43527327 to 43527338 11 - TSS region transcription start site region 72145
Cd33 7 43527399 to 43537424 10025 - protein coding gene CD33 antigen
Tssr72146 7 43527452 to 43527456 4 - TSS region transcription start site region 72146
Tssr72147 7 43527526 to 43527563 37 - TSS region transcription start site region 72147
Tssr72148 7 43527700 to 43527713 13 - TSS region transcription start site region 72148
Tssr72149 7 43527794 to 43527806 12 - TSS region transcription start site region 72149
Tssr72150 7 43527844 to 43527865 21 - TSS region transcription start site region 72150
Tssr72151 7 43527908 to 43527929 21 - TSS region transcription start site region 72151
Tssr72152 7 43528280 to 43528302 22 - TSS region transcription start site region 72152
Tssr72153 7 43528699 to 43528710 11 - TSS region transcription start site region 72153
Tssr72154 7 43530311 to 43530330 19 - TSS region transcription start site region 72154
Tssr72155 7 43530335 to 43530342 7 - TSS region transcription start site region 72155
Tssr72156 7 43530380 to 43530392 12 - TSS region transcription start site region 72156
Tssr72157 7 43532457 to 43532464 7 - TSS region transcription start site region 72157
Tssr72158 7 43533081 to 43533131 50 - TSS region transcription start site region 72158
Tssr72159 7 43533132 to 43533140 8 - TSS region transcription start site region 72159
Tssr72160 7 43533177 to 43533191 14 - TSS region transcription start site region 72160
Tssr72161 7 43533194 to 43533209 15 - TSS region transcription start site region 72161
Tssr2212 7 43544418 to 43544437 19 - TSS region transcription start site region 2212
Tssr66012 7 43546449 to 43546459 10 + TSS region transcription start site region 66012
Tssr72162 7 43553183 to 43553199 16 - TSS region transcription start site region 72162
Tssr66013 7 43553563 to 43553574 11 + TSS region transcription start site region 66013
Tssr2213 7 43553631 to 43553638 7 + TSS region transcription start site region 2213
Tssr2214 7 43554605 to 43554619 14 - TSS region transcription start site region 2214
Gm44818 7 43561319 to 43561676 357 + lincRNA gene predicted gene 44818
Cpgi18937 7 43562124 to 43562648 524 CpG island CpG island 18937
Zfp658 7 43562256 to 43575461 13205 + protein coding gene zinc finger protein 658
Tssr66014 7 43562259 to 43562282 23 + TSS region transcription start site region 66014
Tssr66015 7 43562291 to 43562317 26 + TSS region transcription start site region 66015
Tssr66016 7 43562328 to 43562340 12 + TSS region transcription start site region 66016
Tssr66017 7 43567613 to 43567616 3 + TSS region transcription start site region 66017
D7Mit314 7 43571645 to 43571790 145 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 314
D7Dcr13 7 43571648 to 43571779 131 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 13
Cpgi18938 7 43579483 to 43580150 667 CpG island CpG island 18938
Tssr66018 7 43579577 to 43579640 63 + TSS region transcription start site region 66018
Zfp719 7 43579610 to 43593235 13625 + protein coding gene zinc finger protein 719
Tssr66019 7 43579694 to 43579764 70 + TSS region transcription start site region 66019
Tssr66020 7 43579773 to 43579787 14 + TSS region transcription start site region 66020
Tssr66021 7 43580066 to 43580097 31 + TSS region transcription start site region 66021
Cpgi18939 7 43606940 to 43607457 517 CpG island CpG island 18939
Zfp819 7 43607169 to 43618285 11116 + protein coding gene zinc finger protein 819
Tssr66022 7 43607194 to 43607215 21 + TSS region transcription start site region 66022